(2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[2-[(2S,5R)-5-[(1S,3R,6S,8R,9S,11S,12S,14S,15R,16R)-14-hydroxy-7,7,12,16-tetramethyl-6,9-bis[[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy]-15-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]-5-methyloxolan-2-yl]propan-2-yloxy]oxane-3,4,5-triol

Details

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Internal ID ee3d9ced-71b0-4d66-84a8-b4aaf4411efe
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[2-[(2S,5R)-5-[(1S,3R,6S,8R,9S,11S,12S,14S,15R,16R)-14-hydroxy-7,7,12,16-tetramethyl-6,9-bis[[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy]-15-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]-5-methyloxolan-2-yl]propan-2-yloxy]oxane-3,4,5-triol
SMILES (Canonical) CC1(C(CCC23C1C(CC4C2(C3)CCC5(C4(CC(C5C6(CCC(O6)C(C)(C)OC7C(C(C(C(O7)CO)O)O)O)C)O)C)C)OC8C(C(C(CO8)O)O)O)OC9C(C(C(CO9)O)O)O)C
SMILES (Isomeric) C[C@]12CC[C@@]34C[C@@]35CC[C@@H](C([C@@H]5[C@H](C[C@H]4[C@@]1(C[C@@H]([C@@H]2[C@]6(CC[C@H](O6)C(C)(C)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)C)O)C)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)(C)C)O[C@H]9[C@@H]([C@H]([C@@H](CO9)O)O)O
InChI InChI=1S/C46H76O18/c1-40(2)26(62-38-33(56)29(52)22(50)18-59-38)9-11-46-19-45(46)13-12-42(5)35(44(7)10-8-27(63-44)41(3,4)64-39-34(57)31(54)30(53)24(16-47)61-39)20(48)15-43(42,6)25(45)14-23(36(40)46)60-37-32(55)28(51)21(49)17-58-37/h20-39,47-57H,8-19H2,1-7H3/t20-,21+,22+,23-,24+,25-,26-,27-,28-,29-,30+,31-,32+,33+,34+,35-,36-,37-,38-,39-,42+,43-,44+,45-,46+/m0/s1
InChI Key IQJVQHCRVYIUMO-NFEXMYBCSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C46H76O18
Molecular Weight 917.10 g/mol
Exact Mass 916.50316557 g/mol
Topological Polar Surface Area (TPSA) 287.00 Ų
XlogP -0.30
Atomic LogP (AlogP) -0.81
H-Bond Acceptor 18
H-Bond Donor 11
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[2-[(2S,5R)-5-[(1S,3R,6S,8R,9S,11S,12S,14S,15R,16R)-14-hydroxy-7,7,12,16-tetramethyl-6,9-bis[[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy]-15-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]-5-methyloxolan-2-yl]propan-2-yloxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6581 65.81%
Caco-2 - 0.8822 88.22%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.6782 67.82%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8406 84.06%
OATP1B3 inhibitior + 0.9422 94.22%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior - 0.5687 56.87%
P-glycoprotein inhibitior + 0.7513 75.13%
P-glycoprotein substrate - 0.5000 50.00%
CYP3A4 substrate + 0.7272 72.72%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8237 82.37%
CYP3A4 inhibition - 0.8783 87.83%
CYP2C9 inhibition - 0.8009 80.09%
CYP2C19 inhibition - 0.8368 83.68%
CYP2D6 inhibition - 0.9401 94.01%
CYP1A2 inhibition - 0.8971 89.71%
CYP2C8 inhibition + 0.6892 68.92%
CYP inhibitory promiscuity - 0.9329 93.29%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6399 63.99%
Eye corrosion - 0.9883 98.83%
Eye irritation - 0.9032 90.32%
Skin irritation - 0.7237 72.37%
Skin corrosion - 0.9438 94.38%
Ames mutagenesis - 0.5870 58.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7496 74.96%
Micronuclear - 0.7700 77.00%
Hepatotoxicity - 0.5550 55.50%
skin sensitisation - 0.9098 90.98%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.9504 95.04%
Acute Oral Toxicity (c) I 0.6658 66.58%
Estrogen receptor binding + 0.6969 69.69%
Androgen receptor binding + 0.7539 75.39%
Thyroid receptor binding - 0.5621 56.21%
Glucocorticoid receptor binding + 0.6255 62.55%
Aromatase binding + 0.6374 63.74%
PPAR gamma + 0.7430 74.30%
Honey bee toxicity - 0.6312 63.12%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.8633 86.33%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.74% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.69% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 96.12% 96.61%
CHEMBL240 Q12809 HERG 95.48% 89.76%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.82% 97.09%
CHEMBL226 P30542 Adenosine A1 receptor 94.52% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.10% 96.09%
CHEMBL259 P32245 Melanocortin receptor 4 91.79% 95.38%
CHEMBL220 P22303 Acetylcholinesterase 88.86% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.78% 86.33%
CHEMBL3589 P55263 Adenosine kinase 86.90% 98.05%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 86.70% 100.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.35% 100.00%
CHEMBL2996 Q05655 Protein kinase C delta 86.27% 97.79%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.01% 97.14%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 85.56% 96.95%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.28% 96.21%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 84.93% 95.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.68% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.43% 94.45%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 82.46% 83.57%
CHEMBL1977 P11473 Vitamin D receptor 82.21% 99.43%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 82.08% 92.88%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 82.05% 90.24%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.43% 92.62%
CHEMBL241 Q14432 Phosphodiesterase 3A 81.32% 92.94%
CHEMBL1914 P06276 Butyrylcholinesterase 81.14% 95.00%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 80.96% 98.75%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.91% 91.24%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 80.80% 96.77%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 80.66% 91.03%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.54% 91.07%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 80.51% 99.17%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.38% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Astragalus flavescens

Cross-Links

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PubChem 21580969
LOTUS LTS0207469
wikiData Q105117899