(3S,8S,9S,10S,13R,14S,17R)-3-[(2R,3R,4S,5R,6R)-4-[(2S,3S,4R,5R)-3-acetyloxy-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-13-methyl-17-[(2R)-6-methylheptan-2-yl]-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carboxylic acid

Details

Top
Internal ID 4a5e5462-e759-4b5e-b0ab-3d673946b779
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (3S,8S,9S,10S,13R,14S,17R)-3-[(2R,3R,4S,5R,6R)-4-[(2S,3S,4R,5R)-3-acetyloxy-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-13-methyl-17-[(2R)-6-methylheptan-2-yl]-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carboxylic acid
SMILES (Canonical) CC(C)CCCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)OC5C(C(C(C(O5)CO)O)OC6C(C(C(O6)CO)O)OC(=O)C)O)C(=O)O)C
SMILES (Isomeric) C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC[C@@H](C4)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O[C@H]6[C@H]([C@@H]([C@H](O6)CO)O)OC(=O)C)O)C(=O)O)C
InChI InChI=1S/C40H64O13/c1-20(2)7-6-8-21(3)26-11-12-27-25-10-9-23-17-24(13-16-40(23,38(47)48)28(25)14-15-39(26,27)5)50-36-33(46)34(31(44)29(18-41)51-36)53-37-35(49-22(4)43)32(45)30(19-42)52-37/h9,20-21,24-37,41-42,44-46H,6-8,10-19H2,1-5H3,(H,47,48)/t21-,24+,25+,26-,27+,28+,29-,30-,31-,32-,33-,34+,35+,36-,37+,39-,40-/m1/s1
InChI Key QEJKOXWSWHIIHL-JSXTUIFRSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C40H64O13
Molecular Weight 752.90 g/mol
Exact Mass 752.43469209 g/mol
Topological Polar Surface Area (TPSA) 202.00 Ų
XlogP 5.30
Atomic LogP (AlogP) 3.31
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 13

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (3S,8S,9S,10S,13R,14S,17R)-3-[(2R,3R,4S,5R,6R)-4-[(2S,3S,4R,5R)-3-acetyloxy-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-13-methyl-17-[(2R)-6-methylheptan-2-yl]-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-10-carboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8932 89.32%
Caco-2 - 0.8811 88.11%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.8843 88.43%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8770 87.70%
OATP1B3 inhibitior - 0.2193 21.93%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5250 52.50%
BSEP inhibitior + 0.7697 76.97%
P-glycoprotein inhibitior + 0.7032 70.32%
P-glycoprotein substrate + 0.6529 65.29%
CYP3A4 substrate + 0.7488 74.88%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8855 88.55%
CYP3A4 inhibition - 0.8552 85.52%
CYP2C9 inhibition - 0.8447 84.47%
CYP2C19 inhibition - 0.9271 92.71%
CYP2D6 inhibition - 0.9425 94.25%
CYP1A2 inhibition - 0.9015 90.15%
CYP2C8 inhibition + 0.6152 61.52%
CYP inhibitory promiscuity - 0.8599 85.99%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.4698 46.98%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9164 91.64%
Skin irritation - 0.5390 53.90%
Skin corrosion - 0.9382 93.82%
Ames mutagenesis - 0.7700 77.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3685 36.85%
Micronuclear - 0.8000 80.00%
Hepatotoxicity - 0.6149 61.49%
skin sensitisation - 0.9149 91.49%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.8225 82.25%
Acute Oral Toxicity (c) III 0.7457 74.57%
Estrogen receptor binding + 0.8665 86.65%
Androgen receptor binding + 0.7515 75.15%
Thyroid receptor binding - 0.6231 62.31%
Glucocorticoid receptor binding + 0.5922 59.22%
Aromatase binding + 0.6150 61.50%
PPAR gamma + 0.7097 70.97%
Honey bee toxicity - 0.7109 71.09%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5705 57.05%
Fish aquatic toxicity + 0.9771 97.71%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.89% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.74% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.91% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 96.83% 95.93%
CHEMBL2581 P07339 Cathepsin D 95.85% 98.95%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 94.88% 95.89%
CHEMBL3359 P21462 Formyl peptide receptor 1 93.06% 93.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.12% 86.33%
CHEMBL237 P41145 Kappa opioid receptor 90.78% 98.10%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.21% 97.25%
CHEMBL4227 P25090 Lipoxin A4 receptor 89.73% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.65% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.10% 100.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.76% 99.17%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 86.05% 94.08%
CHEMBL5255 O00206 Toll-like receptor 4 84.59% 92.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.08% 95.89%
CHEMBL340 P08684 Cytochrome P450 3A4 83.44% 91.19%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.37% 95.56%
CHEMBL5028 O14672 ADAM10 83.34% 97.50%
CHEMBL2514 O95665 Neurotensin receptor 2 82.98% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.27% 94.33%
CHEMBL3401 O75469 Pregnane X receptor 82.05% 94.73%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 81.57% 94.62%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 81.38% 89.67%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 80.81% 85.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 80.58% 97.29%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.52% 93.00%
CHEMBL4581 P52732 Kinesin-like protein 1 80.48% 93.18%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 102058637
LOTUS LTS0226960
wikiData Q105219245