2-[5-[4,5-Dihydroxy-6-(hydroxymethyl)-3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4-hydroxy-6-(hydroxymethyl)-2-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl)oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID a38a9380-7c21-44f8-a1c1-4f2cc4c6c41d
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 2-[5-[4,5-dihydroxy-6-(hydroxymethyl)-3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4-hydroxy-6-(hydroxymethyl)-2-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl)oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)O)OC9C(C(C(C(O9)CO)O)O)O)O)OC2C(C(C(C(O2)C)O)O)O)C)C)C)NC1
SMILES (Isomeric) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)O)OC9C(C(C(C(O9)CO)O)O)O)O)OC2C(C(C(C(O2)C)O)O)O)C)C)C)NC1
InChI InChI=1S/C51H85NO21/c1-20-8-13-51(52-16-20)21(2)32-28(73-51)15-27-25-7-6-23-14-24(9-11-49(23,4)26(25)10-12-50(27,32)5)66-47-44(72-45-39(62)36(59)33(56)22(3)65-45)41(64)42(31(19-55)69-47)70-48-43(38(61)35(58)30(18-54)68-48)71-46-40(63)37(60)34(57)29(17-53)67-46/h20-48,52-64H,6-19H2,1-5H3
InChI Key RWXGWFGQHUFQLT-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C51H85NO21
Molecular Weight 1048.20 g/mol
Exact Mass 1047.56140872 g/mol
Topological Polar Surface Area (TPSA) 338.00 Ų
XlogP -0.20
Atomic LogP (AlogP) -2.31
H-Bond Acceptor 22
H-Bond Donor 13
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2-[5-[4,5-Dihydroxy-6-(hydroxymethyl)-3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4-hydroxy-6-(hydroxymethyl)-2-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl)oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5898 58.98%
Caco-2 - 0.8789 87.89%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.4445 44.45%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9185 91.85%
OATP1B3 inhibitior + 0.9498 94.98%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.7045 70.45%
P-glycoprotein inhibitior + 0.7344 73.44%
P-glycoprotein substrate - 0.5841 58.41%
CYP3A4 substrate + 0.7413 74.13%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9579 95.79%
CYP2C9 inhibition - 0.9328 93.28%
CYP2C19 inhibition - 0.9122 91.22%
CYP2D6 inhibition - 0.9255 92.55%
CYP1A2 inhibition - 0.9356 93.56%
CYP2C8 inhibition + 0.6462 64.62%
CYP inhibitory promiscuity - 0.8908 89.08%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5924 59.24%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9055 90.55%
Skin irritation - 0.7295 72.95%
Skin corrosion - 0.9289 92.89%
Ames mutagenesis - 0.7932 79.32%
Human Ether-a-go-go-Related Gene inhibition + 0.7958 79.58%
Micronuclear + 0.5600 56.00%
Hepatotoxicity - 0.9250 92.50%
skin sensitisation - 0.8782 87.82%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.8721 87.21%
Acute Oral Toxicity (c) III 0.5270 52.70%
Estrogen receptor binding + 0.8530 85.30%
Androgen receptor binding + 0.5665 56.65%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding + 0.6064 60.64%
Aromatase binding + 0.6718 67.18%
PPAR gamma + 0.7699 76.99%
Honey bee toxicity - 0.5845 58.45%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity - 0.5848 58.48%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.59% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 97.71% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.68% 91.11%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 94.93% 97.31%
CHEMBL233 P35372 Mu opioid receptor 94.17% 97.93%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 93.19% 89.05%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.94% 97.25%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 92.93% 95.58%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.89% 96.61%
CHEMBL237 P41145 Kappa opioid receptor 92.71% 98.10%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 92.33% 96.21%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.94% 94.45%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.23% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.97% 100.00%
CHEMBL2996 Q05655 Protein kinase C delta 87.96% 97.79%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 87.79% 97.50%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 87.73% 97.86%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.66% 95.50%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 87.38% 96.67%
CHEMBL226 P30542 Adenosine A1 receptor 87.05% 95.93%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 86.60% 92.86%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 85.57% 96.38%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 85.42% 95.36%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.25% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.37% 94.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.20% 95.89%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.57% 100.00%
CHEMBL2094135 Q96BI3 Gamma-secretase 82.48% 98.05%
CHEMBL4581 P52732 Kinesin-like protein 1 81.91% 93.18%
CHEMBL206 P03372 Estrogen receptor alpha 81.67% 97.64%
CHEMBL204 P00734 Thrombin 81.49% 96.01%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.28% 89.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.15% 91.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Solanum suaveolens

Cross-Links

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PubChem 163035602
LOTUS LTS0209825
wikiData Q105246820