methyl (1S,3'R,12R,14S,15R,16S,19R)-12-[(1S,15S,17S,18S)-17-ethyl-6-methoxy-1-methoxycarbonyl-3,13-diazapentacyclo[13.3.1.02,10.04,9.013,18]nonadeca-2(10),4(9),5,7-tetraen-5-yl]-3',20-dimethylspiro[17-oxa-10,20-diazapentacyclo[14.3.1.03,11.04,9.014,19]icosa-3(11),4,6,8-tetraene-15,2'-oxirane]-19-carboxylate

Details

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Internal ID 104b4f52-c170-4e6e-8c06-cf0eb63265ab
Taxonomy Alkaloids and derivatives > Ibogan-type alkaloids
IUPAC Name methyl (1S,3'R,12R,14S,15R,16S,19R)-12-[(1S,15S,17S,18S)-17-ethyl-6-methoxy-1-methoxycarbonyl-3,13-diazapentacyclo[13.3.1.02,10.04,9.013,18]nonadeca-2(10),4(9),5,7-tetraen-5-yl]-3',20-dimethylspiro[17-oxa-10,20-diazapentacyclo[14.3.1.03,11.04,9.014,19]icosa-3(11),4,6,8-tetraene-15,2'-oxirane]-19-carboxylate
SMILES (Canonical) CCC1CC2CC3(C1N(C2)CCC4=C3NC5=C4C=CC(=C5C6CC7C8(COC(C79C(O9)C)N(C8CC1=C6NC2=CC=CC=C12)C)C(=O)OC)OC)C(=O)OC
SMILES (Isomeric) CC[C@H]1C[C@H]2C[C@@]3([C@H]1N(C2)CCC4=C3NC5=C4C=CC(=C5[C@H]6C[C@H]7[C@@]8(CO[C@@H]([C@]79[C@H](O9)C)N([C@H]8CC1=C6NC2=CC=CC=C12)C)C(=O)OC)OC)C(=O)OC
InChI InChI=1S/C44H52N4O7/c1-7-24-16-23-19-42(40(49)52-5)37-27(14-15-48(20-23)38(24)42)26-12-13-31(51-4)34(36(26)46-37)29-17-32-43(41(50)53-6)21-54-39(44(32)22(2)55-44)47(3)33(43)18-28-25-10-8-9-11-30(25)45-35(28)29/h8-13,22-24,29,32-33,38-39,45-46H,7,14-21H2,1-6H3/t22-,23+,24+,29-,32+,33+,38+,39+,42-,43-,44+/m1/s1
InChI Key KSUDRVNXZGXXLA-AJJCPMLLSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C44H52N4O7
Molecular Weight 748.90 g/mol
Exact Mass 748.38360001 g/mol
Topological Polar Surface Area (TPSA) 122.00 Ų
XlogP 5.30
Atomic LogP (AlogP) 5.43
H-Bond Acceptor 9
H-Bond Donor 2
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1S,3'R,12R,14S,15R,16S,19R)-12-[(1S,15S,17S,18S)-17-ethyl-6-methoxy-1-methoxycarbonyl-3,13-diazapentacyclo[13.3.1.02,10.04,9.013,18]nonadeca-2(10),4(9),5,7-tetraen-5-yl]-3',20-dimethylspiro[17-oxa-10,20-diazapentacyclo[14.3.1.03,11.04,9.014,19]icosa-3(11),4,6,8-tetraene-15,2'-oxirane]-19-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8743 87.43%
Caco-2 - 0.7905 79.05%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.4466 44.66%
OATP2B1 inhibitior - 0.5804 58.04%
OATP1B1 inhibitior + 0.8388 83.88%
OATP1B3 inhibitior + 0.9213 92.13%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.9965 99.65%
P-glycoprotein inhibitior + 0.8536 85.36%
P-glycoprotein substrate + 0.8713 87.13%
CYP3A4 substrate + 0.7589 75.89%
CYP2C9 substrate - 0.7936 79.36%
CYP2D6 substrate - 0.6784 67.84%
CYP3A4 inhibition + 0.9231 92.31%
CYP2C9 inhibition - 0.5495 54.95%
CYP2C19 inhibition - 0.5800 58.00%
CYP2D6 inhibition - 0.7825 78.25%
CYP1A2 inhibition - 0.7949 79.49%
CYP2C8 inhibition + 0.7724 77.24%
CYP inhibitory promiscuity + 0.6035 60.35%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.6112 61.12%
Eye corrosion - 0.9869 98.69%
Eye irritation - 0.9245 92.45%
Skin irritation - 0.7992 79.92%
Skin corrosion - 0.9395 93.95%
Ames mutagenesis - 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7900 79.00%
Micronuclear + 0.7800 78.00%
Hepatotoxicity - 0.6000 60.00%
skin sensitisation - 0.8850 88.50%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity - 0.8958 89.58%
Acute Oral Toxicity (c) III 0.5733 57.33%
Estrogen receptor binding + 0.8648 86.48%
Androgen receptor binding + 0.7818 78.18%
Thyroid receptor binding + 0.6514 65.14%
Glucocorticoid receptor binding + 0.8198 81.98%
Aromatase binding + 0.6736 67.36%
PPAR gamma + 0.7701 77.01%
Honey bee toxicity - 0.6398 63.98%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.9613 96.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.61% 96.09%
CHEMBL4302 P08183 P-glycoprotein 1 98.09% 92.98%
CHEMBL2581 P07339 Cathepsin D 97.20% 98.95%
CHEMBL2535 P11166 Glucose transporter 95.91% 98.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.23% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.09% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.19% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.04% 97.25%
CHEMBL1914 P06276 Butyrylcholinesterase 92.93% 95.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.65% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.22% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.45% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.57% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.56% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.81% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.56% 94.00%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 87.06% 96.47%
CHEMBL4208 P20618 Proteasome component C5 86.66% 90.00%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 85.62% 89.62%
CHEMBL2096618 P11274 Bcr/Abl fusion protein 85.52% 85.83%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 85.45% 97.50%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 85.14% 100.00%
CHEMBL3310 Q96DB2 Histone deacetylase 11 84.68% 88.56%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.53% 92.62%
CHEMBL255 P29275 Adenosine A2b receptor 84.48% 98.59%
CHEMBL5028 O14672 ADAM10 84.00% 97.50%
CHEMBL5103 Q969S8 Histone deacetylase 10 83.49% 90.08%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 83.11% 97.14%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.61% 90.71%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 82.15% 97.64%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.17% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Tabernaemontana divaricata

Cross-Links

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PubChem 72549948
NPASS NPC471303
ChEMBL CHEMBL2409162
LOTUS LTS0068296
wikiData Q105145592