(2S,3R)-3,5-dihydroxy-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)-2,3-dihydrochromen-4-one

Details

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Internal ID a4ef15d8-ba8f-46f8-b770-872a2322042c
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-7-O-glycosides
IUPAC Name (2S,3R)-3,5-dihydroxy-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)-2,3-dihydrochromen-4-one
SMILES (Canonical) C1=C(C=C(C(=C1O)O)O)C2C(C(=O)C3=C(C=C(C=C3O2)OC4C(C(C(C(O4)CO)O)O)O)O)O
SMILES (Isomeric) C1=C(C=C(C(=C1O)O)O)[C@H]2[C@H](C(=O)C3=C(C=C(C=C3O2)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O)O
InChI InChI=1S/C21H22O13/c22-5-12-15(27)17(29)19(31)21(34-12)32-7-3-8(23)13-11(4-7)33-20(18(30)16(13)28)6-1-9(24)14(26)10(25)2-6/h1-4,12,15,17-27,29-31H,5H2/t12-,15-,17+,18+,19-,20+,21-/m1/s1
InChI Key VNUSOUZEUKQPTD-YHQKWXBGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C21H22O13
Molecular Weight 482.40 g/mol
Exact Mass 482.10604075 g/mol
Topological Polar Surface Area (TPSA) 227.00 Ų
XlogP -0.70
Atomic LogP (AlogP) -1.64
H-Bond Acceptor 13
H-Bond Donor 9
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R)-3,5-dihydroxy-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-(3,4,5-trihydroxyphenyl)-2,3-dihydrochromen-4-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5116 51.16%
Caco-2 - 0.9392 93.92%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.6068 60.68%
OATP2B1 inhibitior + 0.5770 57.70%
OATP1B1 inhibitior + 0.9086 90.86%
OATP1B3 inhibitior + 0.9265 92.65%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.5000 50.00%
P-glycoprotein inhibitior - 0.7200 72.00%
P-glycoprotein substrate - 0.9110 91.10%
CYP3A4 substrate + 0.5719 57.19%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8522 85.22%
CYP3A4 inhibition - 0.9193 91.93%
CYP2C9 inhibition - 0.9296 92.96%
CYP2C19 inhibition - 0.9289 92.89%
CYP2D6 inhibition - 0.9513 95.13%
CYP1A2 inhibition - 0.9084 90.84%
CYP2C8 inhibition + 0.4868 48.68%
CYP inhibitory promiscuity - 0.7728 77.28%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7144 71.44%
Eye corrosion - 0.9930 99.30%
Eye irritation - 0.8110 81.10%
Skin irritation - 0.8036 80.36%
Skin corrosion - 0.9691 96.91%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6458 64.58%
Micronuclear + 0.6533 65.33%
Hepatotoxicity - 0.6625 66.25%
skin sensitisation - 0.9122 91.22%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.5756 57.56%
Acute Oral Toxicity (c) III 0.4045 40.45%
Estrogen receptor binding + 0.6629 66.29%
Androgen receptor binding + 0.5313 53.13%
Thyroid receptor binding + 0.6012 60.12%
Glucocorticoid receptor binding - 0.5289 52.89%
Aromatase binding - 0.5761 57.61%
PPAR gamma + 0.6827 68.27%
Honey bee toxicity - 0.7897 78.97%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6150 61.50%
Fish aquatic toxicity + 0.8218 82.18%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.61% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 92.36% 94.73%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 91.71% 99.15%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 91.64% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.02% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.37% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.55% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.01% 86.33%
CHEMBL2581 P07339 Cathepsin D 86.64% 98.95%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.08% 99.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.87% 95.56%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.38% 86.92%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.37% 96.21%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 84.41% 95.64%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.86% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.96% 99.23%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 81.79% 96.37%
CHEMBL3194 P02766 Transthyretin 80.55% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Picea abies

Cross-Links

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PubChem 162959877
LOTUS LTS0067740
wikiData Q105289949