[(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[(2S)-6-methyl-2-[(3S,5R,6S,8R,9R,10R,12R,13R,14R,17S)-3,6,12-trihydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]hept-5-en-2-yl]oxyoxan-2-yl]methyl acetate

Details

Top
Internal ID e50c4b71-3647-4e15-bc0a-b18c9e560e3c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name [(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[(2S)-6-methyl-2-[(3S,5R,6S,8R,9R,10R,12R,13R,14R,17S)-3,6,12-trihydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]hept-5-en-2-yl]oxyoxan-2-yl]methyl acetate
SMILES (Canonical) CC(=CCCC(C)(C1CCC2(C1C(CC3C2(CC(C4C3(CCC(C4(C)C)O)C)O)C)O)C)OC5C(C(C(C(O5)COC(=O)C)O)O)O)C
SMILES (Isomeric) CC(=CCC[C@@](C)([C@H]1CC[C@@]2([C@@H]1[C@@H](C[C@H]3[C@]2(C[C@@H]([C@@H]4[C@@]3(CC[C@@H](C4(C)C)O)C)O)C)O)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)COC(=O)C)O)O)O)C
InChI InChI=1S/C38H64O10/c1-20(2)11-10-14-38(9,48-33-31(45)30(44)29(43)25(47-33)19-46-21(3)39)22-12-16-36(7)28(22)23(40)17-26-35(6)15-13-27(42)34(4,5)32(35)24(41)18-37(26,36)8/h11,22-33,40-45H,10,12-19H2,1-9H3/t22-,23+,24-,25+,26+,27-,28-,29+,30-,31+,32-,33-,35+,36+,37+,38-/m0/s1
InChI Key PASQISHUVWBBHF-YAJQEZPASA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C38H64O10
Molecular Weight 680.90 g/mol
Exact Mass 680.44994823 g/mol
Topological Polar Surface Area (TPSA) 166.00 Ų
XlogP 4.30
Atomic LogP (AlogP) 3.87
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 8

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(2R,3S,4S,5R,6S)-3,4,5-trihydroxy-6-[(2S)-6-methyl-2-[(3S,5R,6S,8R,9R,10R,12R,13R,14R,17S)-3,6,12-trihydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]hept-5-en-2-yl]oxyoxan-2-yl]methyl acetate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8958 89.58%
Caco-2 - 0.8643 86.43%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.8312 83.12%
OATP2B1 inhibitior - 0.8632 86.32%
OATP1B1 inhibitior + 0.8260 82.60%
OATP1B3 inhibitior + 0.8651 86.51%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7318 73.18%
BSEP inhibitior + 0.6229 62.29%
P-glycoprotein inhibitior + 0.7780 77.80%
P-glycoprotein substrate - 0.6581 65.81%
CYP3A4 substrate + 0.7237 72.37%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8832 88.32%
CYP3A4 inhibition - 0.9099 90.99%
CYP2C9 inhibition - 0.7775 77.75%
CYP2C19 inhibition - 0.8530 85.30%
CYP2D6 inhibition - 0.9298 92.98%
CYP1A2 inhibition - 0.8005 80.05%
CYP2C8 inhibition + 0.6186 61.86%
CYP inhibitory promiscuity - 0.9049 90.49%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7080 70.80%
Eye corrosion - 0.9923 99.23%
Eye irritation - 0.9173 91.73%
Skin irritation + 0.5248 52.48%
Skin corrosion - 0.9476 94.76%
Ames mutagenesis - 0.7254 72.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7979 79.79%
Micronuclear - 0.8500 85.00%
Hepatotoxicity + 0.6172 61.72%
skin sensitisation - 0.8833 88.33%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity - 0.6695 66.95%
Acute Oral Toxicity (c) I 0.4485 44.85%
Estrogen receptor binding + 0.6550 65.50%
Androgen receptor binding + 0.7241 72.41%
Thyroid receptor binding - 0.5620 56.20%
Glucocorticoid receptor binding + 0.6914 69.14%
Aromatase binding + 0.7119 71.19%
PPAR gamma + 0.6924 69.24%
Honey bee toxicity - 0.6129 61.29%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9780 97.80%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.18% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.69% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.08% 97.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 94.98% 96.61%
CHEMBL2179 P04062 Beta-glucocerebrosidase 94.35% 85.31%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.34% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 92.09% 95.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.68% 94.45%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 90.68% 82.69%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.42% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.79% 100.00%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 89.00% 97.21%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.37% 85.14%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.10% 95.89%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.93% 95.50%
CHEMBL5255 O00206 Toll-like receptor 4 84.75% 92.50%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 84.58% 96.95%
CHEMBL1914 P06276 Butyrylcholinesterase 84.25% 95.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 83.80% 96.77%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.73% 100.00%
CHEMBL2581 P07339 Cathepsin D 83.59% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.35% 89.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.99% 94.33%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 82.60% 96.90%
CHEMBL5028 O14672 ADAM10 81.90% 97.50%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.52% 97.36%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 80.49% 82.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Panax ginseng

Cross-Links

Top
PubChem 163007908
LOTUS LTS0132262
wikiData Q105204715