(4S)-5,5-dimethyl-4-[(3R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxybutyl]cyclohex-2-en-1-one

Details

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Internal ID 819f8042-e627-4bd8-8e28-094e9a43c6b7
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Fatty acyl glycosides > Fatty acyl glycosides of mono- and disaccharides
IUPAC Name (4S)-5,5-dimethyl-4-[(3R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxybutyl]cyclohex-2-en-1-one
SMILES (Canonical) CC(CCC1C=CC(=O)CC1(C)C)OC2C(C(C(C(O2)COC3C(C(C(C(O3)CO)O)O)O)O)O)O
SMILES (Isomeric) C[C@H](CC[C@H]1C=CC(=O)CC1(C)C)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O)O
InChI InChI=1S/C24H40O12/c1-11(4-5-12-6-7-13(26)8-24(12,2)3)34-23-21(32)19(30)17(28)15(36-23)10-33-22-20(31)18(29)16(27)14(9-25)35-22/h6-7,11-12,14-23,25,27-32H,4-5,8-10H2,1-3H3/t11-,12+,14-,15-,16-,17-,18+,19+,20-,21-,22-,23-/m1/s1
InChI Key XTJADGLZHRIXSG-ONWIAJSPSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C24H40O12
Molecular Weight 520.60 g/mol
Exact Mass 520.25197671 g/mol
Topological Polar Surface Area (TPSA) 196.00 Ų
XlogP -1.80
Atomic LogP (AlogP) -2.03
H-Bond Acceptor 12
H-Bond Donor 7
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (4S)-5,5-dimethyl-4-[(3R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxybutyl]cyclohex-2-en-1-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6567 65.67%
Caco-2 - 0.8730 87.30%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.8902 89.02%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8791 87.91%
OATP1B3 inhibitior - 0.2456 24.56%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior - 0.7929 79.29%
P-glycoprotein inhibitior - 0.6028 60.28%
P-glycoprotein substrate - 0.7386 73.86%
CYP3A4 substrate + 0.6456 64.56%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8875 88.75%
CYP3A4 inhibition - 0.9375 93.75%
CYP2C9 inhibition - 0.8627 86.27%
CYP2C19 inhibition - 0.9006 90.06%
CYP2D6 inhibition - 0.9522 95.22%
CYP1A2 inhibition - 0.9174 91.74%
CYP2C8 inhibition - 0.8545 85.45%
CYP inhibitory promiscuity - 0.9579 95.79%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6886 68.86%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9559 95.59%
Skin irritation - 0.7670 76.70%
Skin corrosion - 0.9650 96.50%
Ames mutagenesis - 0.5654 56.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7189 71.89%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.7255 72.55%
skin sensitisation - 0.8981 89.81%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity - 0.6111 61.11%
Mitochondrial toxicity - 0.6875 68.75%
Nephrotoxicity + 0.7580 75.80%
Acute Oral Toxicity (c) III 0.6349 63.49%
Estrogen receptor binding + 0.5939 59.39%
Androgen receptor binding - 0.6986 69.86%
Thyroid receptor binding + 0.5438 54.38%
Glucocorticoid receptor binding + 0.5550 55.50%
Aromatase binding + 0.6484 64.84%
PPAR gamma + 0.5537 55.37%
Honey bee toxicity - 0.8368 83.68%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.7050 70.50%
Fish aquatic toxicity + 0.9289 92.89%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.35% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.63% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.43% 96.09%
CHEMBL2581 P07339 Cathepsin D 93.85% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.45% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.54% 94.45%
CHEMBL220 P22303 Acetylcholinesterase 88.89% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.30% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 88.24% 94.73%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 86.46% 93.04%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.23% 95.56%
CHEMBL1937 Q92769 Histone deacetylase 2 83.70% 94.75%
CHEMBL2996 Q05655 Protein kinase C delta 83.60% 97.79%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.69% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.45% 89.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.34% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Polygonatum zanlanscianense

Cross-Links

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PubChem 44575745
NPASS NPC278506
LOTUS LTS0006296
wikiData Q105341597