(3R,5S)-3-[(3S,5S,10S,13S,14R,16R,17R)-16-hydroxy-10,13-dimethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,4,5,6,12,14,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-5-[(2R,3S)-3-methyl-2-propan-2-yloxiran-2-yl]oxolan-2-one

Details

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Internal ID b0610307-1338-45fb-aa7d-1f875be588bf
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (3R,5S)-3-[(3S,5S,10S,13S,14R,16R,17R)-16-hydroxy-10,13-dimethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,4,5,6,12,14,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-5-[(2R,3S)-3-methyl-2-propan-2-yloxiran-2-yl]oxolan-2-one
SMILES (Canonical) CC1C(O1)(C2CC(C(=O)O2)C3C(CC4C3(CC=C5C4=CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)O)O)O)C)C)O)C(C)C
SMILES (Isomeric) C[C@H]1[C@@](O1)([C@@H]2C[C@@H](C(=O)O2)[C@H]3[C@@H](C[C@@H]4[C@@]3(CC=C5C4=CC[C@@H]6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)C)C)O)C(C)C
InChI InChI=1S/C35H52O10/c1-16(2)35(17(3)45-35)26-13-21(31(41)44-26)27-24(37)14-23-20-7-6-18-12-19(8-10-33(18,4)22(20)9-11-34(23,27)5)42-32-30(40)29(39)28(38)25(15-36)43-32/h7,9,16-19,21,23-30,32,36-40H,6,8,10-15H2,1-5H3/t17-,18-,19-,21+,23-,24+,25+,26-,27-,28+,29-,30+,32+,33-,34-,35+/m0/s1
InChI Key XATNGESTVSBAGC-VMPFJVBPSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C35H52O10
Molecular Weight 632.80 g/mol
Exact Mass 632.35604785 g/mol
Topological Polar Surface Area (TPSA) 158.00 Ų
XlogP 2.30
Atomic LogP (AlogP) 2.39
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3R,5S)-3-[(3S,5S,10S,13S,14R,16R,17R)-16-hydroxy-10,13-dimethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,4,5,6,12,14,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-5-[(2R,3S)-3-methyl-2-propan-2-yloxiran-2-yl]oxolan-2-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9244 92.44%
Caco-2 - 0.8479 84.79%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.8542 85.42%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8197 81.97%
OATP1B3 inhibitior + 0.8961 89.61%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.6073 60.73%
P-glycoprotein inhibitior + 0.6757 67.57%
P-glycoprotein substrate + 0.5905 59.05%
CYP3A4 substrate + 0.7293 72.93%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8916 89.16%
CYP3A4 inhibition - 0.7380 73.80%
CYP2C9 inhibition - 0.7706 77.06%
CYP2C19 inhibition - 0.8955 89.55%
CYP2D6 inhibition - 0.9187 91.87%
CYP1A2 inhibition - 0.8775 87.75%
CYP2C8 inhibition + 0.5870 58.70%
CYP inhibitory promiscuity - 0.8778 87.78%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5395 53.95%
Eye corrosion - 0.9872 98.72%
Eye irritation - 0.9250 92.50%
Skin irritation - 0.5542 55.42%
Skin corrosion - 0.9339 93.39%
Ames mutagenesis - 0.6854 68.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6836 68.36%
Micronuclear - 0.6700 67.00%
Hepatotoxicity - 0.6852 68.52%
skin sensitisation - 0.8840 88.40%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity + 0.6569 65.69%
Acute Oral Toxicity (c) I 0.6025 60.25%
Estrogen receptor binding + 0.7468 74.68%
Androgen receptor binding + 0.7293 72.93%
Thyroid receptor binding - 0.5273 52.73%
Glucocorticoid receptor binding + 0.6915 69.15%
Aromatase binding + 0.6194 61.94%
PPAR gamma + 0.6149 61.49%
Honey bee toxicity - 0.6464 64.64%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.9723 97.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.08% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.29% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.04% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.92% 97.09%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 93.70% 94.23%
CHEMBL218 P21554 Cannabinoid CB1 receptor 93.16% 96.61%
CHEMBL2581 P07339 Cathepsin D 92.92% 98.95%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.38% 96.21%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.65% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.29% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 90.06% 85.14%
CHEMBL3359 P21462 Formyl peptide receptor 1 88.55% 93.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.29% 100.00%
CHEMBL1937 Q92769 Histone deacetylase 2 87.22% 94.75%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.19% 94.45%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.96% 86.92%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.59% 89.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.89% 97.14%
CHEMBL220 P22303 Acetylcholinesterase 84.17% 94.45%
CHEMBL2996 Q05655 Protein kinase C delta 83.08% 97.79%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.02% 91.07%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.85% 94.00%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 82.77% 100.00%
CHEMBL5255 O00206 Toll-like receptor 4 82.61% 92.50%
CHEMBL5103 Q969S8 Histone deacetylase 10 80.49% 90.08%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.01% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gymnanthemum amygdalinum

Cross-Links

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PubChem 162858132
LOTUS LTS0234330
wikiData Q105324135