(2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,8S,8aS,9S,12aS,14aR,14bR)-8,9-dihydroxy-4,4,6a,6b,11,11,14b-heptamethyl-8a-[[(E)-2-methylbut-2-enoyl]oxymethyl]-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylic acid

Details

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Internal ID 70c4d7a4-758c-4de7-bf8a-99af8dddae9c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,8S,8aS,9S,12aS,14aR,14bR)-8,9-dihydroxy-4,4,6a,6b,11,11,14b-heptamethyl-8a-[[(E)-2-methylbut-2-enoyl]oxymethyl]-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylic acid
SMILES (Canonical) CC=C(C)C(=O)OCC12C(CC(CC1O)(C)C)C3=CCC4C5(CCC(C(C5CCC4(C3(CC2O)C)C)(C)C)OC6C(C(C(C(O6)C(=O)O)O)OC7C(C(C(C(O7)CO)O)O)O)O)C
SMILES (Isomeric) C/C=C(\C)/C(=O)OC[C@@]12[C@H](C[C@@]3(C(=CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H](C5(C)C)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)C(=O)O)O)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)O)C)C)[C@@H]1CC(C[C@@H]2O)(C)C)C)O
InChI InChI=1S/C47H74O16/c1-10-22(2)39(58)59-21-47-24(17-42(3,4)18-28(47)49)23-11-12-27-44(7)15-14-30(43(5,6)26(44)13-16-45(27,8)46(23,9)19-29(47)50)61-41-35(55)36(34(54)37(63-41)38(56)57)62-40-33(53)32(52)31(51)25(20-48)60-40/h10-11,24-37,40-41,48-55H,12-21H2,1-9H3,(H,56,57)/b22-10+/t24-,25+,26-,27+,28-,29-,30-,31+,32-,33+,34-,35+,36-,37-,40-,41+,44-,45+,46+,47+/m0/s1
InChI Key KDUNRTGBYYTMMX-GUFKJUHQSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C47H74O16
Molecular Weight 895.10 g/mol
Exact Mass 894.49768627 g/mol
Topological Polar Surface Area (TPSA) 262.00 Ų
XlogP 4.10
Atomic LogP (AlogP) 2.34
H-Bond Acceptor 15
H-Bond Donor 9
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,8S,8aS,9S,12aS,14aR,14bR)-8,9-dihydroxy-4,4,6a,6b,11,11,14b-heptamethyl-8a-[[(E)-2-methylbut-2-enoyl]oxymethyl]-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7601 76.01%
Caco-2 - 0.8772 87.72%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.8703 87.03%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7592 75.92%
OATP1B3 inhibitior - 0.4610 46.10%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5026 50.26%
BSEP inhibitior + 0.8189 81.89%
P-glycoprotein inhibitior + 0.7596 75.96%
P-glycoprotein substrate - 0.6571 65.71%
CYP3A4 substrate + 0.7250 72.50%
CYP2C9 substrate - 0.8018 80.18%
CYP2D6 substrate - 0.8966 89.66%
CYP3A4 inhibition - 0.8310 83.10%
CYP2C9 inhibition - 0.8704 87.04%
CYP2C19 inhibition - 0.9216 92.16%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.9009 90.09%
CYP2C8 inhibition + 0.7430 74.30%
CYP inhibitory promiscuity - 0.9733 97.33%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6024 60.24%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9051 90.51%
Skin irritation - 0.5876 58.76%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.8348 83.48%
Human Ether-a-go-go-Related Gene inhibition - 0.3932 39.32%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.9013 90.13%
Respiratory toxicity - 0.5333 53.33%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity - 0.7459 74.59%
Acute Oral Toxicity (c) III 0.8023 80.23%
Estrogen receptor binding + 0.7838 78.38%
Androgen receptor binding + 0.7440 74.40%
Thyroid receptor binding - 0.5449 54.49%
Glucocorticoid receptor binding + 0.7743 77.43%
Aromatase binding + 0.6050 60.50%
PPAR gamma + 0.8098 80.98%
Honey bee toxicity - 0.6552 65.52%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5355 53.55%
Fish aquatic toxicity + 0.9585 95.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.39% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.01% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.71% 94.45%
CHEMBL221 P23219 Cyclooxygenase-1 92.78% 90.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.53% 86.33%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 89.53% 93.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.96% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.12% 95.89%
CHEMBL5028 O14672 ADAM10 85.85% 97.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.64% 97.09%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 85.49% 95.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.90% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.70% 100.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 83.85% 94.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.39% 100.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.71% 99.17%
CHEMBL5255 O00206 Toll-like receptor 4 82.11% 92.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 81.10% 97.25%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.07% 96.21%
CHEMBL226 P30542 Adenosine A1 receptor 80.16% 95.93%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gymnema sylvestre

Cross-Links

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PubChem 10629548
LOTUS LTS0056730
wikiData Q105139403