[6]-Gingediol

Details

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Internal ID f42157e4-d702-4a19-ad73-b897d019e1b3
Taxonomy Benzenoids > Phenols > Methoxyphenols > Gingerdiols
IUPAC Name (3S,5R)-1-(4-hydroxy-3-methoxyphenyl)decane-3,5-diol
SMILES (Canonical) CCCCCC(CC(CCC1=CC(=C(C=C1)O)OC)O)O
SMILES (Isomeric) CCCCC[C@H](C[C@H](CCC1=CC(=C(C=C1)O)OC)O)O
InChI InChI=1S/C17H28O4/c1-3-4-5-6-14(18)12-15(19)9-7-13-8-10-16(20)17(11-13)21-2/h8,10-11,14-15,18-20H,3-7,9,12H2,1-2H3/t14-,15+/m1/s1
InChI Key QYXKQNMJTHPKBP-CABCVRRESA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C17H28O4
Molecular Weight 296.40 g/mol
Exact Mass 296.19875937 g/mol
Topological Polar Surface Area (TPSA) 69.90 Ų
XlogP 3.00
Atomic LogP (AlogP) 3.03
H-Bond Acceptor 4
H-Bond Donor 3
Rotatable Bonds 10

Synonyms

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53318-09-5
AKOS040763754

2D Structure

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2D Structure of [6]-Gingediol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9697 96.97%
Caco-2 + 0.5377 53.77%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.8114 81.14%
OATP2B1 inhibitior - 0.8574 85.74%
OATP1B1 inhibitior + 0.8944 89.44%
OATP1B3 inhibitior + 0.9088 90.88%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.5784 57.84%
P-glycoprotein inhibitior - 0.8940 89.40%
P-glycoprotein substrate + 0.6657 66.57%
CYP3A4 substrate + 0.5170 51.70%
CYP2C9 substrate - 0.6000 60.00%
CYP2D6 substrate + 0.4840 48.40%
CYP3A4 inhibition - 0.5495 54.95%
CYP2C9 inhibition - 0.7927 79.27%
CYP2C19 inhibition - 0.6565 65.65%
CYP2D6 inhibition - 0.7899 78.99%
CYP1A2 inhibition + 0.5471 54.71%
CYP2C8 inhibition + 0.8810 88.10%
CYP inhibitory promiscuity - 0.7670 76.70%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8200 82.00%
Carcinogenicity (trinary) Non-required 0.7459 74.59%
Eye corrosion - 0.9740 97.40%
Eye irritation - 0.6196 61.96%
Skin irritation - 0.5470 54.70%
Skin corrosion - 0.8297 82.97%
Ames mutagenesis - 0.7400 74.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6821 68.21%
Micronuclear - 0.9700 97.00%
Hepatotoxicity - 0.7026 70.26%
skin sensitisation + 0.5000 50.00%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.7971 79.71%
Acute Oral Toxicity (c) III 0.6898 68.98%
Estrogen receptor binding + 0.8237 82.37%
Androgen receptor binding + 0.5816 58.16%
Thyroid receptor binding + 0.7254 72.54%
Glucocorticoid receptor binding - 0.5056 50.56%
Aromatase binding - 0.6584 65.84%
PPAR gamma + 0.6686 66.86%
Honey bee toxicity - 0.9462 94.62%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5307 53.07%
Fish aquatic toxicity + 0.9651 96.51%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.45% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.13% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.61% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 96.58% 99.17%
CHEMBL1907 P15144 Aminopeptidase N 93.59% 93.31%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 92.37% 95.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.14% 97.25%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 91.32% 92.08%
CHEMBL240 Q12809 HERG 91.04% 89.76%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.47% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.34% 94.45%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 88.87% 100.00%
CHEMBL1255126 O15151 Protein Mdm4 88.00% 90.20%
CHEMBL2535 P11166 Glucose transporter 87.49% 98.75%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.57% 90.71%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.14% 95.89%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 81.61% 92.88%
CHEMBL5939 Q9NZ08 Endoplasmic reticulum aminopeptidase 1 81.42% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Zingiber officinale

Cross-Links

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PubChem 101660275
NPASS NPC27067
LOTUS LTS0101522
wikiData Q104959498