(2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-6-[(1R,2R,4S,4'S,5'R,6R,7S,8R,9R,12S,13R,16S)-2,4'-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-4-hydroxy-2-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID 2abf8815-a435-4bfc-b4ad-6380181bdbaf
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-6-[(1R,2R,4S,4'S,5'R,6R,7S,8R,9R,12S,13R,16S)-2,4'-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-4-hydroxy-2-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1COC2(CC1O)C(C3C(O2)CC4(C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)C)O)O)O)O)OC9C(C(C(C(O9)C)O)O)O)C)C)O)C
SMILES (Isomeric) C[C@@H]1CO[C@@]2(C[C@@H]1O)[C@H]([C@H]3[C@@H](O2)C[C@@]4([C@@]3(CC[C@H]5[C@H]4CC=C6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@@H]([C@H]([C@@H](O8)C)O)O)O)O)O[C@H]9[C@@H]([C@@H]([C@H]([C@@H](O9)C)O)O)O)C)C)O)C
InChI InChI=1S/C45H72O18/c1-18-17-56-45(14-26(18)47)19(2)29-27(63-45)15-44(55)25-8-7-22-13-23(9-11-42(22,5)24(25)10-12-43(29,44)6)59-41-38(62-40-35(53)33(51)31(49)21(4)58-40)36(54)37(28(16-46)60-41)61-39-34(52)32(50)30(48)20(3)57-39/h7,18-21,23-41,46-55H,8-17H2,1-6H3/t18-,19+,20+,21+,23+,24+,25-,26+,27+,28-,29+,30+,31+,32-,33-,34-,35-,36+,37-,38-,39+,40+,41-,42+,43-,44-,45-/m1/s1
InChI Key SHMHKBDXIIVQMO-SBQOSPSLSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C45H72O18
Molecular Weight 901.00 g/mol
Exact Mass 900.47186544 g/mol
Topological Polar Surface Area (TPSA) 276.00 Ų
XlogP -0.90
Atomic LogP (AlogP) -0.67
H-Bond Acceptor 18
H-Bond Donor 10
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4R,5R,6S)-2-[(2R,3S,4S,5R,6R)-6-[(1R,2R,4S,4'S,5'R,6R,7S,8R,9R,12S,13R,16S)-2,4'-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-4-hydroxy-2-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7571 75.71%
Caco-2 - 0.8911 89.11%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.7376 73.76%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8643 86.43%
OATP1B3 inhibitior + 0.8994 89.94%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.9355 93.55%
P-glycoprotein inhibitior + 0.7339 73.39%
P-glycoprotein substrate + 0.5983 59.83%
CYP3A4 substrate + 0.7365 73.65%
CYP2C9 substrate - 0.7915 79.15%
CYP2D6 substrate - 0.8348 83.48%
CYP3A4 inhibition - 0.9268 92.68%
CYP2C9 inhibition - 0.9182 91.82%
CYP2C19 inhibition - 0.9234 92.34%
CYP2D6 inhibition - 0.9343 93.43%
CYP1A2 inhibition - 0.9102 91.02%
CYP2C8 inhibition + 0.7527 75.27%
CYP inhibitory promiscuity - 0.9302 93.02%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5116 51.16%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9106 91.06%
Skin irritation + 0.4929 49.29%
Skin corrosion - 0.9426 94.26%
Ames mutagenesis - 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7536 75.36%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.7875 78.75%
skin sensitisation - 0.9214 92.14%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.7965 79.65%
Acute Oral Toxicity (c) I 0.5904 59.04%
Estrogen receptor binding + 0.8338 83.38%
Androgen receptor binding + 0.7562 75.62%
Thyroid receptor binding - 0.5468 54.68%
Glucocorticoid receptor binding + 0.6316 63.16%
Aromatase binding + 0.6719 67.19%
PPAR gamma + 0.7778 77.78%
Honey bee toxicity - 0.6243 62.43%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5250 52.50%
Fish aquatic toxicity + 0.9176 91.76%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.21% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.60% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.57% 97.25%
CHEMBL226 P30542 Adenosine A1 receptor 95.98% 95.93%
CHEMBL1914 P06276 Butyrylcholinesterase 95.29% 95.00%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 93.82% 89.05%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.25% 100.00%
CHEMBL325 Q13547 Histone deacetylase 1 92.59% 95.92%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.44% 95.89%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.15% 96.61%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.07% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.82% 86.33%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.83% 95.50%
CHEMBL1937 Q92769 Histone deacetylase 2 88.63% 94.75%
CHEMBL2581 P07339 Cathepsin D 88.00% 98.95%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.91% 95.89%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.88% 85.14%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.86% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.44% 89.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 84.03% 96.90%
CHEMBL2243 O00519 Anandamide amidohydrolase 83.23% 97.53%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.90% 92.94%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.29% 93.56%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.17% 97.36%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.75% 92.62%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.49% 94.45%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.24% 91.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dracaena cochinchinensis

Cross-Links

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PubChem 163011733
LOTUS LTS0148991
wikiData Q105253060