N-[1-[3,4-dihydroxy-6-(hydroxymethyl)-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanamide

Details

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Internal ID 8c038df4-4cc3-4e59-81c1-13c5f7882b7e
Taxonomy Lipids and lipid-like molecules > Sphingolipids > Glycosphingolipids > Simple glycosylceramides > Glycosyl-N-acylsphingosines
IUPAC Name N-[1-[3,4-dihydroxy-6-(hydroxymethyl)-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanamide
SMILES (Canonical) CCCCCCCCCCCCCCCCCCCCCCC(C(=O)NC(COC1C(C(C(C(O1)CO)OC2C(C(C(C(O2)CO)O)O)O)O)O)C(C=CCCCCCCCCCCC(C)CC)O)O
SMILES (Isomeric) CCCCCCCCCCCCCCCCCCCCCCC(C(=O)NC(COC1C(C(C(C(O1)CO)OC2C(C(C(C(O2)CO)O)O)O)O)O)C(C=CCCCCCCCCCCC(C)CC)O)O
InChI InChI=1S/C55H105NO14/c1-4-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-25-28-31-34-37-44(60)53(66)56-42(43(59)36-33-30-27-24-22-21-23-26-29-32-35-41(3)5-2)40-67-54-51(65)49(63)52(46(39-58)69-54)70-55-50(64)48(62)47(61)45(38-57)68-55/h33,36,41-52,54-55,57-65H,4-32,34-35,37-40H2,1-3H3,(H,56,66)
InChI Key CGFYLVORONLSQF-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C55H105NO14
Molecular Weight 1004.40 g/mol
Exact Mass 1003.75350702 g/mol
Topological Polar Surface Area (TPSA) 248.00 Ų
XlogP 13.00
Atomic LogP (AlogP) 7.55
H-Bond Acceptor 14
H-Bond Donor 10
Rotatable Bonds 44

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of N-[1-[3,4-dihydroxy-6-(hydroxymethyl)-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-3-hydroxy-16-methyloctadec-4-en-2-yl]-2-hydroxytetracosanamide

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6397 63.97%
Caco-2 - 0.8693 86.93%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.7229 72.29%
OATP2B1 inhibitior - 0.5772 57.72%
OATP1B1 inhibitior + 0.8182 81.82%
OATP1B3 inhibitior + 0.9036 90.36%
MATE1 inhibitior - 0.9412 94.12%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.8618 86.18%
P-glycoprotein inhibitior + 0.7053 70.53%
P-glycoprotein substrate - 0.5098 50.98%
CYP3A4 substrate + 0.6805 68.05%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8739 87.39%
CYP3A4 inhibition - 0.5238 52.38%
CYP2C9 inhibition - 0.9222 92.22%
CYP2C19 inhibition - 0.8954 89.54%
CYP2D6 inhibition - 0.8351 83.51%
CYP1A2 inhibition - 0.9239 92.39%
CYP2C8 inhibition + 0.4876 48.76%
CYP inhibitory promiscuity - 0.8520 85.20%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6567 65.67%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9048 90.48%
Skin irritation - 0.7534 75.34%
Skin corrosion - 0.9490 94.90%
Ames mutagenesis - 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7513 75.13%
Micronuclear + 0.5300 53.00%
Hepatotoxicity - 0.8075 80.75%
skin sensitisation - 0.8901 89.01%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.6638 66.38%
Acute Oral Toxicity (c) III 0.6912 69.12%
Estrogen receptor binding + 0.8104 81.04%
Androgen receptor binding + 0.6071 60.71%
Thyroid receptor binding - 0.5434 54.34%
Glucocorticoid receptor binding + 0.5466 54.66%
Aromatase binding + 0.6075 60.75%
PPAR gamma + 0.7018 70.18%
Honey bee toxicity - 0.7874 78.74%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5429 54.29%
Fish aquatic toxicity + 0.6927 69.27%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.03% 98.95%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 98.62% 97.29%
CHEMBL3359 P21462 Formyl peptide receptor 1 98.23% 93.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 98.10% 99.17%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 97.76% 92.86%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.61% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.02% 91.11%
CHEMBL5255 O00206 Toll-like receptor 4 93.09% 92.50%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 93.03% 96.47%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 92.02% 91.24%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 91.95% 94.33%
CHEMBL3401 O75469 Pregnane X receptor 91.92% 94.73%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 91.76% 100.00%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 91.58% 92.08%
CHEMBL4227 P25090 Lipoxin A4 receptor 91.25% 100.00%
CHEMBL2265 P23141 Acyl coenzyme A:cholesterol acyltransferase 90.65% 85.94%
CHEMBL221 P23219 Cyclooxygenase-1 90.20% 90.17%
CHEMBL230 P35354 Cyclooxygenase-2 90.06% 89.63%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 89.85% 96.00%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 89.60% 92.88%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 89.48% 89.34%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 89.19% 95.58%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 88.53% 97.47%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 86.72% 91.81%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 86.41% 82.50%
CHEMBL2514 O95665 Neurotensin receptor 2 85.94% 100.00%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 85.23% 92.32%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 84.83% 95.71%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 83.72% 100.00%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 83.44% 96.38%
CHEMBL218 P21554 Cannabinoid CB1 receptor 83.10% 96.61%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.78% 90.71%
CHEMBL2413 P32246 C-C chemokine receptor type 1 82.50% 89.50%
CHEMBL3776 Q14790 Caspase-8 82.18% 97.06%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 82.10% 95.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 81.51% 97.25%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.23% 96.90%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 80.66% 98.75%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 80.55% 92.78%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 74074889
LOTUS LTS0113262
wikiData Q104957629