(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(1S,3R,6S,8R,11S,12S,14S,15R,16R)-15-[(2S,5R)-5-(2-hydroxypropan-2-yl)-2-methyloxolan-2-yl]-7,7,12,16-tetramethyl-6-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-14-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]oxy]oxane-3,4,5-triol

Details

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Internal ID 209516ea-99d4-4208-9879-d27e69fd6271
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(1S,3R,6S,8R,11S,12S,14S,15R,16R)-15-[(2S,5R)-5-(2-hydroxypropan-2-yl)-2-methyloxolan-2-yl]-7,7,12,16-tetramethyl-6-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-14-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]oxy]oxane-3,4,5-triol
SMILES (Canonical) CC1(C2CCC3C4(CC(C(C4(CCC35C2(C5)CCC1OC6C(C(C(CO6)O)O)O)C)C7(CCC(O7)C(C)(C)O)C)OC8C(C(C(C(O8)CO)O)O)O)C)C
SMILES (Isomeric) C[C@]12CC[C@@]34C[C@@]35CC[C@@H](C([C@@H]5CC[C@H]4[C@@]1(C[C@@H]([C@@H]2[C@@]6(CC[C@@H](O6)C(C)(C)O)C)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)C)(C)C)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O
InChI InChI=1S/C41H68O13/c1-35(2)23-8-9-24-38(6)16-21(51-34-31(48)29(46)28(45)22(17-42)52-34)32(39(7)12-10-26(54-39)36(3,4)49)37(38,5)14-15-41(24)19-40(23,41)13-11-25(35)53-33-30(47)27(44)20(43)18-50-33/h20-34,42-49H,8-19H2,1-7H3/t20-,21+,22-,23+,24+,25+,26-,27+,28-,29+,30-,31-,32+,33+,34-,37-,38+,39+,40-,41+/m1/s1
InChI Key NHPPDKWIUAHCHE-JGSOMBFKSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C41H68O13
Molecular Weight 769.00 g/mol
Exact Mass 768.46599222 g/mol
Topological Polar Surface Area (TPSA) 208.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 1.75
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[[(1S,3R,6S,8R,11S,12S,14S,15R,16R)-15-[(2S,5R)-5-(2-hydroxypropan-2-yl)-2-methyloxolan-2-yl]-7,7,12,16-tetramethyl-6-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-14-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]oxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6581 65.81%
Caco-2 - 0.8649 86.49%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6782 67.82%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8374 83.74%
OATP1B3 inhibitior + 0.9422 94.22%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior - 0.8466 84.66%
P-glycoprotein inhibitior + 0.7501 75.01%
P-glycoprotein substrate - 0.5638 56.38%
CYP3A4 substrate + 0.7240 72.40%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8361 83.61%
CYP3A4 inhibition - 0.8783 87.83%
CYP2C9 inhibition - 0.8009 80.09%
CYP2C19 inhibition - 0.8368 83.68%
CYP2D6 inhibition - 0.9401 94.01%
CYP1A2 inhibition - 0.8971 89.71%
CYP2C8 inhibition + 0.6863 68.63%
CYP inhibitory promiscuity - 0.9329 93.29%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6399 63.99%
Eye corrosion - 0.9883 98.83%
Eye irritation - 0.9076 90.76%
Skin irritation - 0.7237 72.37%
Skin corrosion - 0.9438 94.38%
Ames mutagenesis - 0.6370 63.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7739 77.39%
Micronuclear - 0.7700 77.00%
Hepatotoxicity - 0.7141 71.41%
skin sensitisation - 0.9098 90.98%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.9223 92.23%
Acute Oral Toxicity (c) I 0.6658 66.58%
Estrogen receptor binding + 0.5269 52.69%
Androgen receptor binding + 0.7448 74.48%
Thyroid receptor binding - 0.5731 57.31%
Glucocorticoid receptor binding + 0.5886 58.86%
Aromatase binding + 0.6524 65.24%
PPAR gamma + 0.6757 67.57%
Honey bee toxicity - 0.6521 65.21%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.8633 86.33%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.78% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.45% 97.25%
CHEMBL218 P21554 Cannabinoid CB1 receptor 97.31% 96.61%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 96.32% 83.57%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.62% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.03% 97.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 90.81% 96.21%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 90.66% 92.88%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 90.40% 100.00%
CHEMBL220 P22303 Acetylcholinesterase 89.83% 94.45%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 89.65% 97.47%
CHEMBL204 P00734 Thrombin 88.95% 96.01%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 88.83% 96.77%
CHEMBL1977 P11473 Vitamin D receptor 88.48% 99.43%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.40% 95.50%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 87.51% 96.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.74% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 86.63% 95.93%
CHEMBL259 P32245 Melanocortin receptor 4 86.34% 95.38%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.80% 86.33%
CHEMBL3589 P55263 Adenosine kinase 85.41% 98.05%
CHEMBL2581 P07339 Cathepsin D 85.39% 98.95%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.39% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.15% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.62% 89.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.62% 92.94%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 84.44% 100.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.60% 92.62%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.58% 97.14%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 81.05% 97.33%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.39% 91.24%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.26% 96.90%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Astragalus prusianus

Cross-Links

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PubChem 21586434
LOTUS LTS0159767
wikiData Q105179538