6-[(2S,3S,4R,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]-5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)chromen-4-one

Details

Top
Internal ID 76a72906-a638-4156-a2b8-233c5681178e
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid C-glycosides
IUPAC Name 6-[(2S,3S,4R,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]-5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)chromen-4-one
SMILES (Canonical) COC1=C(C=CC(=C1)C2=CC(=O)C3=C(O2)C=C(C(=C3O)C4C(C(C(C(O4)CO)O)OC5C(C(C(C(O5)CO)O)O)O)O)O)O
SMILES (Isomeric) COC1=C(C=CC(=C1)C2=CC(=O)C3=C(O2)C=C(C(=C3O)[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O)O)O
InChI InChI=1S/C28H32O16/c1-40-14-4-9(2-3-10(14)31)13-5-11(32)18-15(41-13)6-12(33)19(22(18)36)26-25(39)27(21(35)17(8-30)42-26)44-28-24(38)23(37)20(34)16(7-29)43-28/h2-6,16-17,20-21,23-31,33-39H,7-8H2,1H3/t16-,17-,20-,21-,23+,24-,25+,26+,27+,28+/m1/s1
InChI Key HGWRKIOMUDWHHZ-WJRKJMBXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C28H32O16
Molecular Weight 624.50 g/mol
Exact Mass 624.16903493 g/mol
Topological Polar Surface Area (TPSA) 266.00 Ų
XlogP -1.40
Atomic LogP (AlogP) -2.08
H-Bond Acceptor 16
H-Bond Donor 10
Rotatable Bonds 7

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 6-[(2S,3S,4R,5R,6R)-3,5-dihydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]-5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)chromen-4-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5457 54.57%
Caco-2 - 0.9197 91.97%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.5961 59.61%
OATP2B1 inhibitior - 0.5697 56.97%
OATP1B1 inhibitior + 0.8680 86.80%
OATP1B3 inhibitior + 0.9786 97.86%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.6646 66.46%
P-glycoprotein inhibitior - 0.5642 56.42%
P-glycoprotein substrate - 0.6079 60.79%
CYP3A4 substrate + 0.6477 64.77%
CYP2C9 substrate - 0.8389 83.89%
CYP2D6 substrate - 0.8501 85.01%
CYP3A4 inhibition - 0.9437 94.37%
CYP2C9 inhibition - 0.9060 90.60%
CYP2C19 inhibition - 0.8926 89.26%
CYP2D6 inhibition - 0.9515 95.15%
CYP1A2 inhibition - 0.9150 91.50%
CYP2C8 inhibition + 0.7549 75.49%
CYP inhibitory promiscuity - 0.7142 71.42%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6642 66.42%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9135 91.35%
Skin irritation - 0.8320 83.20%
Skin corrosion - 0.9606 96.06%
Ames mutagenesis - 0.5229 52.29%
Human Ether-a-go-go-Related Gene inhibition + 0.6478 64.78%
Micronuclear + 0.6533 65.33%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.9324 93.24%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.9097 90.97%
Acute Oral Toxicity (c) III 0.6678 66.78%
Estrogen receptor binding + 0.8261 82.61%
Androgen receptor binding + 0.6896 68.96%
Thyroid receptor binding - 0.4941 49.41%
Glucocorticoid receptor binding + 0.5523 55.23%
Aromatase binding + 0.6141 61.41%
PPAR gamma + 0.7650 76.50%
Honey bee toxicity - 0.6919 69.19%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.6698 66.98%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.66% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 97.22% 94.00%
CHEMBL2581 P07339 Cathepsin D 96.48% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.85% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.76% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.89% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.74% 85.14%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.21% 96.21%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 90.02% 99.15%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 89.25% 86.92%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 87.83% 96.09%
CHEMBL3401 O75469 Pregnane X receptor 84.86% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.40% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.93% 95.89%
CHEMBL220 P22303 Acetylcholinesterase 82.60% 94.45%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.98% 94.45%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.75% 96.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.29% 90.71%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.85% 97.36%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Isatis tinctoria

Cross-Links

Top
PubChem 102352203
LOTUS LTS0241292
wikiData Q105028016