5,8,10-trihydroxy-3,3-dimethyl-11-(2-methylbut-3-en-2-yl)pyrano[2,3-c]xanthen-7(3H)-one

Details

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Internal ID 3b6dc6d3-8508-4cbc-873a-44029e7d41f4
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > Pyranoxanthones
IUPAC Name 5,8,10-trihydroxy-3,3-dimethyl-11-(2-methylbut-3-en-2-yl)pyrano[2,3-c]xanthen-7-one
SMILES (Canonical) CC1(C=CC2=C3C(=CC(=C2O1)O)C(=O)C4=C(O3)C(=C(C=C4O)O)C(C)(C)C=C)C
SMILES (Isomeric) CC1(C=CC2=C3C(=CC(=C2O1)O)C(=O)C4=C(O3)C(=C(C=C4O)O)C(C)(C)C=C)C
InChI InChI=1S/C23H22O6/c1-6-22(2,3)17-14(25)10-13(24)16-18(27)12-9-15(26)20-11(19(12)28-21(16)17)7-8-23(4,5)29-20/h6-10,24-26H,1H2,2-5H3
InChI Key VDIZUJPZYMJMRS-UHFFFAOYSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C23H22O6
Molecular Weight 394.40 g/mol
Exact Mass 394.14163842 g/mol
Topological Polar Surface Area (TPSA) 96.20 Ų
XlogP 5.30
Atomic LogP (AlogP) 4.71
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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BDBM50175015
5,8,10-trihydroxy-3,3-dimethyl-11-(2-methylbut-3-en-2-yl)pyrano[2,3-c]xanthen-7(3H)-one

2D Structure

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2D Structure of 5,8,10-trihydroxy-3,3-dimethyl-11-(2-methylbut-3-en-2-yl)pyrano[2,3-c]xanthen-7(3H)-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9591 95.91%
Caco-2 - 0.5432 54.32%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.6107 61.07%
OATP2B1 inhibitior - 0.5645 56.45%
OATP1B1 inhibitior + 0.8949 89.49%
OATP1B3 inhibitior + 0.9586 95.86%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior + 0.7379 73.79%
P-glycoprotein inhibitior + 0.6309 63.09%
P-glycoprotein substrate - 0.5892 58.92%
CYP3A4 substrate + 0.6212 62.12%
CYP2C9 substrate - 0.6166 61.66%
CYP2D6 substrate - 0.8418 84.18%
CYP3A4 inhibition + 0.6446 64.46%
CYP2C9 inhibition - 0.5930 59.30%
CYP2C19 inhibition - 0.5615 56.15%
CYP2D6 inhibition - 0.8284 82.84%
CYP1A2 inhibition + 0.7432 74.32%
CYP2C8 inhibition + 0.4724 47.24%
CYP inhibitory promiscuity + 0.5841 58.41%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5725 57.25%
Eye corrosion - 0.9874 98.74%
Eye irritation + 0.7745 77.45%
Skin irritation - 0.6804 68.04%
Skin corrosion - 0.8789 87.89%
Ames mutagenesis + 0.5066 50.66%
Human Ether-a-go-go-Related Gene inhibition - 0.3620 36.20%
Micronuclear + 0.6800 68.00%
Hepatotoxicity + 0.6375 63.75%
skin sensitisation - 0.6539 65.39%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.6444 64.44%
Mitochondrial toxicity - 0.5500 55.00%
Nephrotoxicity - 0.5960 59.60%
Acute Oral Toxicity (c) III 0.7041 70.41%
Estrogen receptor binding + 0.8613 86.13%
Androgen receptor binding + 0.6164 61.64%
Thyroid receptor binding + 0.7692 76.92%
Glucocorticoid receptor binding + 0.8030 80.30%
Aromatase binding + 0.8238 82.38%
PPAR gamma + 0.8364 83.64%
Honey bee toxicity - 0.7426 74.26%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9830 98.30%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL2782 P35610 Acyl coenzyme A:cholesterol acyltransferase 1 40000 nM
IC50
PMID: 17665951

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.68% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 98.61% 91.49%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.02% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.98% 89.00%
CHEMBL2581 P07339 Cathepsin D 93.53% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.62% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 90.67% 94.73%
CHEMBL1937 Q92769 Histone deacetylase 2 88.01% 94.75%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 86.46% 95.71%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 86.04% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.61% 99.23%
CHEMBL3192 Q9BY41 Histone deacetylase 8 83.98% 93.99%
CHEMBL2964 P36507 Dual specificity mitogen-activated protein kinase kinase 2 82.78% 80.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.08% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.65% 94.00%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 81.33% 93.65%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Maclura tricuspidata

Cross-Links

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PubChem 44405880
NPASS NPC303460
ChEMBL CHEMBL440392
LOTUS LTS0100492
wikiData Q105284192