(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6S,7S,8R,9S,12S,13S,16S,18S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl]oxyoxane-3,4,5-triol

Details

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Internal ID 14c1b12c-b782-46d0-a6b8-c649e30b6c26
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6S,7S,8R,9S,12S,13S,16S,18S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl]oxyoxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)O)O)O)C)C)C)NC1
SMILES (Isomeric) C[C@H]1CC[C@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC[C@@H]6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)C)C)C)NC1
InChI InChI=1S/C33H55NO7/c1-17-7-12-33(34-15-17)18(2)26-24(41-33)14-23-21-6-5-19-13-20(8-10-31(19,3)22(21)9-11-32(23,26)4)39-30-29(38)28(37)27(36)25(16-35)40-30/h17-30,34-38H,5-16H2,1-4H3/t17-,18-,19-,20-,21+,22-,23-,24-,25+,26-,27+,28-,29+,30+,31-,32-,33-/m0/s1
InChI Key JDRMNHOIHYWSFN-UGSFAPCESA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C33H55NO7
Molecular Weight 577.80 g/mol
Exact Mass 577.39785309 g/mol
Topological Polar Surface Area (TPSA) 121.00 Ų
XlogP 4.60
Atomic LogP (AlogP) 3.19
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6S,7S,8R,9S,12S,13S,16S,18S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl]oxyoxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5898 58.98%
Caco-2 - 0.8477 84.77%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.4445 44.45%
OATP2B1 inhibitior - 0.5741 57.41%
OATP1B1 inhibitior + 0.9220 92.20%
OATP1B3 inhibitior + 0.9498 94.98%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.8717 87.17%
P-glycoprotein inhibitior + 0.6319 63.19%
P-glycoprotein substrate - 0.6656 66.56%
CYP3A4 substrate + 0.7292 72.92%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9579 95.79%
CYP2C9 inhibition - 0.9328 93.28%
CYP2C19 inhibition - 0.9122 91.22%
CYP2D6 inhibition - 0.9255 92.55%
CYP1A2 inhibition - 0.9356 93.56%
CYP2C8 inhibition + 0.5091 50.91%
CYP inhibitory promiscuity - 0.8908 89.08%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5924 59.24%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9303 93.03%
Skin irritation - 0.7295 72.95%
Skin corrosion - 0.9289 92.89%
Ames mutagenesis - 0.7902 79.02%
Human Ether-a-go-go-Related Gene inhibition + 0.7153 71.53%
Micronuclear + 0.5600 56.00%
Hepatotoxicity - 0.8353 83.53%
skin sensitisation - 0.8782 87.82%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.7686 76.86%
Acute Oral Toxicity (c) III 0.5270 52.70%
Estrogen receptor binding + 0.6045 60.45%
Androgen receptor binding - 0.5995 59.95%
Thyroid receptor binding - 0.5932 59.32%
Glucocorticoid receptor binding - 0.4786 47.86%
Aromatase binding + 0.6504 65.04%
PPAR gamma + 0.5434 54.34%
Honey bee toxicity - 0.6482 64.82%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity - 0.5848 58.48%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.66% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 98.36% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.64% 91.11%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 95.67% 96.21%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.28% 97.25%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 93.79% 89.05%
CHEMBL237 P41145 Kappa opioid receptor 93.46% 98.10%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.47% 94.45%
CHEMBL233 P35372 Mu opioid receptor 92.04% 97.93%
CHEMBL2996 Q05655 Protein kinase C delta 90.10% 97.79%
CHEMBL218 P21554 Cannabinoid CB1 receptor 89.82% 96.61%
CHEMBL241 Q14432 Phosphodiesterase 3A 89.65% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.08% 100.00%
CHEMBL204 P00734 Thrombin 88.78% 96.01%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 88.26% 97.31%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 86.99% 96.67%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 86.86% 92.86%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 86.28% 95.50%
CHEMBL4581 P52732 Kinesin-like protein 1 84.99% 93.18%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 84.73% 95.36%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.39% 95.89%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.97% 96.95%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 83.44% 95.58%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 83.24% 97.50%
CHEMBL206 P03372 Estrogen receptor alpha 82.98% 97.64%
CHEMBL5255 O00206 Toll-like receptor 4 82.02% 92.50%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 80.45% 97.86%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Solanum arboreum

Cross-Links

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PubChem 15286303
LOTUS LTS0090944
wikiData Q105125693