(2S,3R,4S,5R,6R)-2-[(2R,3R,4S,5S,6R)-2-[[(3S,5S,10S,13R,17R)-17-[(1R,2S,4S,5S,6R,8S,11S)-1,4-dihydroxy-8,11-dimethyl-3,7,9-trioxatricyclo[6.3.0.02,6]undecan-5-yl]-10,13-dimethyl-2,3,4,5,6,7,11,12,16,17-decahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 05f94de6-0354-4580-bd6f-4464c957a2be
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (2S,3R,4S,5R,6R)-2-[(2R,3R,4S,5S,6R)-2-[[(3S,5S,10S,13R,17R)-17-[(1R,2S,4S,5S,6R,8S,11S)-1,4-dihydroxy-8,11-dimethyl-3,7,9-trioxatricyclo[6.3.0.02,6]undecan-5-yl]-10,13-dimethyl-2,3,4,5,6,7,11,12,16,17-decahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1COC2(C1(C3C(O2)C(C(O3)O)C4CC=C5C4(CCC6=C5CCC7C6(CCC(C7)OC8C(C(C(C(O8)CO)O)O)OC9C(C(C(C(O9)CO)O)O)O)C)C)O)C
SMILES (Isomeric) C[C@H]1CO[C@@]2([C@@]1([C@@H]3[C@H](O2)[C@@H]([C@H](O3)O)[C@H]4CC=C5[C@@]4(CCC6=C5CC[C@@H]7[C@@]6(CC[C@@H](C7)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O)O[C@H]9[C@@H]([C@H]([C@H]([C@H](O9)CO)O)O)O)C)C)O)C
InChI InChI=1S/C41H62O16/c1-17-16-51-40(4)41(17,50)34-32(57-40)26(35(49)56-34)23-8-7-21-20-6-5-18-13-19(9-11-38(18,2)22(20)10-12-39(21,23)3)52-37-33(30(47)28(45)25(15-43)54-37)55-36-31(48)29(46)27(44)24(14-42)53-36/h7,17-19,23-37,42-50H,5-6,8-16H2,1-4H3/t17-,18-,19-,23+,24+,25+,26-,27-,28+,29-,30-,31+,32+,33+,34-,35-,36-,37+,38-,39-,40-,41+/m0/s1
InChI Key XXHCZXMNBAXGQV-HRHUZOEUSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C41H62O16
Molecular Weight 810.90 g/mol
Exact Mass 810.40378589 g/mol
Topological Polar Surface Area (TPSA) 247.00 Ų
XlogP -0.40
Atomic LogP (AlogP) -0.52
H-Bond Acceptor 16
H-Bond Donor 9
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5R,6R)-2-[(2R,3R,4S,5S,6R)-2-[[(3S,5S,10S,13R,17R)-17-[(1R,2S,4S,5S,6R,8S,11S)-1,4-dihydroxy-8,11-dimethyl-3,7,9-trioxatricyclo[6.3.0.02,6]undecan-5-yl]-10,13-dimethyl-2,3,4,5,6,7,11,12,16,17-decahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7814 78.14%
Caco-2 - 0.8867 88.67%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.8016 80.16%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8426 84.26%
OATP1B3 inhibitior + 0.8903 89.03%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.8680 86.80%
P-glycoprotein inhibitior + 0.7220 72.20%
P-glycoprotein substrate + 0.6216 62.16%
CYP3A4 substrate + 0.7362 73.62%
CYP2C9 substrate - 0.8007 80.07%
CYP2D6 substrate - 0.8523 85.23%
CYP3A4 inhibition - 0.9325 93.25%
CYP2C9 inhibition - 0.9056 90.56%
CYP2C19 inhibition - 0.9096 90.96%
CYP2D6 inhibition - 0.9364 93.64%
CYP1A2 inhibition - 0.8942 89.42%
CYP2C8 inhibition + 0.7381 73.81%
CYP inhibitory promiscuity - 0.8308 83.08%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5393 53.93%
Eye corrosion - 0.9883 98.83%
Eye irritation - 0.9157 91.57%
Skin irritation - 0.6015 60.15%
Skin corrosion - 0.9431 94.31%
Ames mutagenesis - 0.7579 75.79%
Human Ether-a-go-go-Related Gene inhibition + 0.6888 68.88%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.5987 59.87%
skin sensitisation - 0.9273 92.73%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.7239 72.39%
Acute Oral Toxicity (c) I 0.6643 66.43%
Estrogen receptor binding + 0.8369 83.69%
Androgen receptor binding + 0.7547 75.47%
Thyroid receptor binding - 0.5619 56.19%
Glucocorticoid receptor binding + 0.6454 64.54%
Aromatase binding + 0.6760 67.60%
PPAR gamma + 0.7302 73.02%
Honey bee toxicity - 0.6166 61.66%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9555 95.55%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.94% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.82% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.57% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.68% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 94.62% 100.00%
CHEMBL1951 P21397 Monoamine oxidase A 94.27% 91.49%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.08% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 91.78% 95.89%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 91.76% 94.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.36% 94.00%
CHEMBL2581 P07339 Cathepsin D 90.07% 98.95%
CHEMBL1914 P06276 Butyrylcholinesterase 89.65% 95.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 88.81% 96.61%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.93% 95.50%
CHEMBL1937 Q92769 Histone deacetylase 2 86.80% 94.75%
CHEMBL211 P08172 Muscarinic acetylcholine receptor M2 85.83% 94.97%
CHEMBL226 P30542 Adenosine A1 receptor 85.62% 95.93%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.40% 89.00%
CHEMBL2996 Q05655 Protein kinase C delta 84.95% 97.79%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.89% 85.14%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 83.75% 97.33%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 83.62% 94.62%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.54% 86.33%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 82.13% 94.08%
CHEMBL2243 O00519 Anandamide amidohydrolase 81.37% 97.53%
CHEMBL1871 P10275 Androgen Receptor 81.36% 96.43%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Vernonia colorata

Cross-Links

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PubChem 163007856
LOTUS LTS0266293
wikiData Q105344018