2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S)-2,2-dimethyl-6-methylidenecyclohexyl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-1,3,3-trimethylcyclohexene

Details

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Internal ID f128876a-ebc3-4ab2-85fb-32a0ab6dc533
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Tetraterpenoids > Carotenoids > Carotenes
IUPAC Name 2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S)-2,2-dimethyl-6-methylidenecyclohexyl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-1,3,3-trimethylcyclohexene
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C40H56/c1-31(19-13-21-33(3)25-27-37-35(5)23-15-29-39(37,7)8)17-11-12-18-32(2)20-14-22-34(4)26-28-38-36(6)24-16-30-40(38,9)10/h11-14,17-22,25-28,37H,5,15-16,23-24,29-30H2,1-4,6-10H3/b12-11+,19-13+,20-14+,27-25+,28-26+,31-17+,32-18+,33-21+,34-22+/t37-/m1/s1
InChI Key AFQPSLVGGMCBOR-QTRZAOAUSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C40H56
Molecular Weight 536.90 g/mol
Exact Mass 536.438201786 g/mol
Topological Polar Surface Area (TPSA) 0.00 Ų
XlogP 13.90
Atomic LogP (AlogP) 12.46
H-Bond Acceptor 0
H-Bond Donor 0
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S)-2,2-dimethyl-6-methylidenecyclohexyl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-1,3,3-trimethylcyclohexene

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9905 99.05%
Caco-2 - 0.7662 76.62%
Blood Brain Barrier + 0.9250 92.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Lysosomes 0.6170 61.70%
OATP2B1 inhibitior - 0.8586 85.86%
OATP1B1 inhibitior - 0.5745 57.45%
OATP1B3 inhibitior - 0.5897 58.97%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.9949 99.49%
P-glycoprotein inhibitior + 0.8263 82.63%
P-glycoprotein substrate - 0.7839 78.39%
CYP3A4 substrate + 0.6606 66.06%
CYP2C9 substrate - 0.8111 81.11%
CYP2D6 substrate - 0.7951 79.51%
CYP3A4 inhibition - 0.8966 89.66%
CYP2C9 inhibition - 0.8273 82.73%
CYP2C19 inhibition - 0.7366 73.66%
CYP2D6 inhibition - 0.9422 94.22%
CYP1A2 inhibition - 0.8885 88.85%
CYP2C8 inhibition + 0.5470 54.70%
CYP inhibitory promiscuity - 0.5355 53.55%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.7000 70.00%
Carcinogenicity (trinary) Non-required 0.4844 48.44%
Eye corrosion - 0.8892 88.92%
Eye irritation - 0.9110 91.10%
Skin irritation - 0.5835 58.35%
Skin corrosion - 0.9744 97.44%
Ames mutagenesis - 0.5674 56.74%
Human Ether-a-go-go-Related Gene inhibition + 0.8926 89.26%
Micronuclear - 0.9800 98.00%
Hepatotoxicity - 0.5434 54.34%
skin sensitisation + 0.8691 86.91%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.6667 66.67%
Mitochondrial toxicity - 0.6551 65.51%
Nephrotoxicity + 0.8107 81.07%
Acute Oral Toxicity (c) III 0.8660 86.60%
Estrogen receptor binding + 0.8191 81.91%
Androgen receptor binding + 0.6868 68.68%
Thyroid receptor binding + 0.7539 75.39%
Glucocorticoid receptor binding + 0.7545 75.45%
Aromatase binding - 0.6977 69.77%
PPAR gamma + 0.7348 73.48%
Honey bee toxicity - 0.7839 78.39%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2061 P19793 Retinoid X receptor alpha 96.05% 91.67%
CHEMBL230 P35354 Cyclooxygenase-2 96.00% 89.63%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.74% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 95.45% 94.75%
CHEMBL1870 P28702 Retinoid X receptor beta 94.72% 95.00%
CHEMBL2004 P48443 Retinoid X receptor gamma 92.86% 100.00%
CHEMBL325 Q13547 Histone deacetylase 1 90.92% 95.92%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 90.58% 95.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.08% 97.25%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.95% 86.33%
CHEMBL3192 Q9BY41 Histone deacetylase 8 85.74% 93.99%
CHEMBL1977 P11473 Vitamin D receptor 85.72% 99.43%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.48% 100.00%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 85.15% 91.71%
CHEMBL1829 O15379 Histone deacetylase 3 84.80% 95.00%
CHEMBL3524 P56524 Histone deacetylase 4 84.00% 92.97%
CHEMBL4040 P28482 MAP kinase ERK2 83.87% 83.82%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.47% 95.56%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.54% 92.94%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 162895042
LOTUS LTS0202365
wikiData Q104911419