(2S,3R,4R,5R,6S)-2-[(2E,6Z)-8-[(2S,3R,4R,5S,6S)-3,5-dihydroxy-6-methyl-4-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-2,6-dimethylocta-2,6-dienoxy]-6-methyloxane-3,4,5-triol

Details

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Internal ID 1cb50403-8766-4839-af12-bb4813c53460
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2E,6Z)-8-[(2S,3R,4R,5S,6S)-3,5-dihydroxy-6-methyl-4-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-2,6-dimethylocta-2,6-dienoxy]-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OCC(=CCCC(=CCOC2C(C(C(C(O2)C)O)OC3C(C(C(C(O3)C)O)O)O)O)C)C)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)OC/C(=C/CC/C(=C\CO[C@@H]2[C@@H]([C@@H]([C@H]([C@@H](O2)C)O)O[C@@H]3[C@@H]([C@@H]([C@H]([C@@H](O3)C)O)O)O)O)/C)/C)O)O)O
InChI InChI=1S/C28H48O14/c1-12(7-6-8-13(2)11-38-26-22(34)20(32)17(29)14(3)39-26)9-10-37-27-24(36)25(19(31)16(5)40-27)42-28-23(35)21(33)18(30)15(4)41-28/h8-9,14-36H,6-7,10-11H2,1-5H3/b12-9-,13-8+/t14-,15-,16-,17-,18-,19-,20+,21+,22+,23+,24+,25+,26-,27-,28+/m0/s1
InChI Key VRXPQJLQNAEBKC-NZPIIZOASA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H48O14
Molecular Weight 608.70 g/mol
Exact Mass 608.30440620 g/mol
Topological Polar Surface Area (TPSA) 217.00 Ų
XlogP -1.60
Atomic LogP (AlogP) -1.80
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4R,5R,6S)-2-[(2E,6Z)-8-[(2S,3R,4R,5S,6S)-3,5-dihydroxy-6-methyl-4-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-2,6-dimethylocta-2,6-dienoxy]-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7323 73.23%
Caco-2 - 0.8513 85.13%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.7724 77.24%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9149 91.49%
OATP1B3 inhibitior + 0.9022 90.22%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.7050 70.50%
P-glycoprotein inhibitior - 0.5000 50.00%
P-glycoprotein substrate - 0.7861 78.61%
CYP3A4 substrate + 0.5785 57.85%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8282 82.82%
CYP3A4 inhibition - 0.8802 88.02%
CYP2C9 inhibition - 0.8468 84.68%
CYP2C19 inhibition - 0.7765 77.65%
CYP2D6 inhibition - 0.8792 87.92%
CYP1A2 inhibition - 0.7958 79.58%
CYP2C8 inhibition - 0.6516 65.16%
CYP inhibitory promiscuity - 0.7984 79.84%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6732 67.32%
Eye corrosion - 0.9865 98.65%
Eye irritation - 0.9292 92.92%
Skin irritation - 0.7173 71.73%
Skin corrosion - 0.9604 96.04%
Ames mutagenesis - 0.5654 56.54%
Human Ether-a-go-go-Related Gene inhibition - 0.3867 38.67%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.7413 74.13%
skin sensitisation - 0.8553 85.53%
Respiratory toxicity - 0.6778 67.78%
Reproductive toxicity - 0.5137 51.37%
Mitochondrial toxicity - 0.6125 61.25%
Nephrotoxicity - 0.7049 70.49%
Acute Oral Toxicity (c) III 0.6680 66.80%
Estrogen receptor binding + 0.6341 63.41%
Androgen receptor binding - 0.5863 58.63%
Thyroid receptor binding - 0.5279 52.79%
Glucocorticoid receptor binding - 0.5103 51.03%
Aromatase binding + 0.5580 55.80%
PPAR gamma + 0.6458 64.58%
Honey bee toxicity - 0.7030 70.30%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.6000 60.00%
Fish aquatic toxicity + 0.9682 96.82%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.81% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.14% 96.09%
CHEMBL3401 O75469 Pregnane X receptor 90.41% 94.73%
CHEMBL3714130 P46095 G-protein coupled receptor 6 89.91% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.59% 86.33%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 86.82% 92.08%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.27% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.35% 89.00%
CHEMBL2581 P07339 Cathepsin D 80.89% 98.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Vangueria agrestis

Cross-Links

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PubChem 162932344
LOTUS LTS0166639
wikiData Q105292035