(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(5S,6E)-3-hydroxy-3,7,11-trimethyldodeca-1,6,10-trien-5-yl]oxyoxane-3,4,5-triol

Details

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Internal ID f7278730-3dfd-4294-b15c-797382cfc775
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(5S,6E)-3-hydroxy-3,7,11-trimethyldodeca-1,6,10-trien-5-yl]oxyoxane-3,4,5-triol
SMILES (Canonical) CC(=CCCC(=CC(CC(C)(C=C)O)OC1C(C(C(C(O1)CO)O)O)O)C)C
SMILES (Isomeric) CC(=CCC/C(=C/[C@H](CC(C)(C=C)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O)/C)C
InChI InChI=1S/C21H36O7/c1-6-21(5,26)11-15(10-14(4)9-7-8-13(2)3)27-20-19(25)18(24)17(23)16(12-22)28-20/h6,8,10,15-20,22-26H,1,7,9,11-12H2,2-5H3/b14-10+/t15-,16-,17-,18+,19-,20-,21?/m1/s1
InChI Key DBRKOXMXUVNKPH-NQRCZTNOSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C21H36O7
Molecular Weight 400.50 g/mol
Exact Mass 400.24610348 g/mol
Topological Polar Surface Area (TPSA) 120.00 Ų
XlogP 1.90
Atomic LogP (AlogP) 1.19
H-Bond Acceptor 7
H-Bond Donor 5
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(5S,6E)-3-hydroxy-3,7,11-trimethyldodeca-1,6,10-trien-5-yl]oxyoxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4678 46.78%
Caco-2 - 0.7208 72.08%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.7735 77.35%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8741 87.41%
OATP1B3 inhibitior + 0.8627 86.27%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.8079 80.79%
P-glycoprotein inhibitior - 0.7799 77.99%
P-glycoprotein substrate - 0.8685 86.85%
CYP3A4 substrate + 0.6109 61.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8469 84.69%
CYP3A4 inhibition - 0.7952 79.52%
CYP2C9 inhibition - 0.7399 73.99%
CYP2C19 inhibition - 0.7935 79.35%
CYP2D6 inhibition - 0.9348 93.48%
CYP1A2 inhibition - 0.8196 81.96%
CYP2C8 inhibition - 0.5996 59.96%
CYP inhibitory promiscuity - 0.9419 94.19%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.7179 71.79%
Eye corrosion - 0.9873 98.73%
Eye irritation - 0.9486 94.86%
Skin irritation - 0.6892 68.92%
Skin corrosion - 0.9476 94.76%
Ames mutagenesis - 0.6691 66.91%
Human Ether-a-go-go-Related Gene inhibition - 0.3765 37.65%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.6395 63.95%
skin sensitisation - 0.7870 78.70%
Respiratory toxicity - 0.7556 75.56%
Reproductive toxicity + 0.5778 57.78%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.6000 60.00%
Acute Oral Toxicity (c) III 0.6853 68.53%
Estrogen receptor binding - 0.5553 55.53%
Androgen receptor binding - 0.5371 53.71%
Thyroid receptor binding + 0.5820 58.20%
Glucocorticoid receptor binding - 0.5334 53.34%
Aromatase binding + 0.6416 64.16%
PPAR gamma + 0.6110 61.10%
Honey bee toxicity - 0.6381 63.81%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.7500 75.00%
Fish aquatic toxicity + 0.8526 85.26%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3401 O75469 Pregnane X receptor 94.67% 94.73%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.62% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.01% 99.17%
CHEMBL2581 P07339 Cathepsin D 91.89% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.91% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.39% 96.09%
CHEMBL215 P09917 Arachidonate 5-lipoxygenase 88.34% 92.68%
CHEMBL3714130 P46095 G-protein coupled receptor 6 87.39% 97.36%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 84.88% 97.47%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 83.77% 90.93%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 82.61% 96.47%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.54% 95.89%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 82.34% 97.21%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 82.01% 82.50%
CHEMBL3359 P21462 Formyl peptide receptor 1 80.39% 93.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Amaranthus retroflexus

Cross-Links

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PubChem 11502216
LOTUS LTS0071917
wikiData Q104399800