(2S,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[[(3S,5S,6S,8S,10S,13S,14S,16S,17R)-16-hydroxy-17-[(2S)-2-hydroxy-6-methylheptan-2-yl]-10,13-dimethyl-6-sulfooxy-2,3,4,5,6,7,8,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-2-carboxylic acid

Details

Top
Internal ID 7f6006d6-8205-4eb5-8741-5731434176a6
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroid glucuronide conjugates
IUPAC Name (2S,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[[(3S,5S,6S,8S,10S,13S,14S,16S,17R)-16-hydroxy-17-[(2S)-2-hydroxy-6-methylheptan-2-yl]-10,13-dimethyl-6-sulfooxy-2,3,4,5,6,7,8,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C33H54O13S/c1-16(2)7-6-10-33(5,40)28-22(34)15-20-18-14-23(46-47(41,42)43)21-13-17(8-11-31(21,3)19(18)9-12-32(20,28)4)44-30-26(37)24(35)25(36)27(45-30)29(38)39/h9,16-18,20-28,30,34-37,40H,6-8,10-15H2,1-5H3,(H,38,39)(H,41,42,43)/t17-,18+,20-,21+,22-,23-,24-,25-,26+,27-,28-,30+,31+,32-,33-/m0/s1
InChI Key HBXRYRGHUVPFTA-DUEAHTJWSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C33H54O13S
Molecular Weight 690.80 g/mol
Exact Mass 690.32851295 g/mol
Topological Polar Surface Area (TPSA) 229.00 Ų
XlogP 3.00
Atomic LogP (AlogP) 2.19
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 10

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[[(3S,5S,6S,8S,10S,13S,14S,16S,17R)-16-hydroxy-17-[(2S)-2-hydroxy-6-methylheptan-2-yl]-10,13-dimethyl-6-sulfooxy-2,3,4,5,6,7,8,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxane-2-carboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8905 89.05%
Caco-2 - 0.8737 87.37%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.5022 50.22%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8703 87.03%
OATP1B3 inhibitior + 0.9158 91.58%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.6605 66.05%
P-glycoprotein inhibitior + 0.6954 69.54%
P-glycoprotein substrate + 0.5749 57.49%
CYP3A4 substrate + 0.7304 73.04%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8800 88.00%
CYP3A4 inhibition - 0.6944 69.44%
CYP2C9 inhibition - 0.7478 74.78%
CYP2C19 inhibition - 0.7072 70.72%
CYP2D6 inhibition - 0.8622 86.22%
CYP1A2 inhibition - 0.7367 73.67%
CYP2C8 inhibition + 0.7388 73.88%
CYP inhibitory promiscuity - 0.8598 85.98%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.5900 59.00%
Carcinogenicity (trinary) Non-required 0.6158 61.58%
Eye corrosion - 0.9800 98.00%
Eye irritation - 0.9192 91.92%
Skin irritation - 0.7317 73.17%
Skin corrosion - 0.8876 88.76%
Ames mutagenesis - 0.7178 71.78%
Human Ether-a-go-go-Related Gene inhibition - 0.4021 40.21%
Micronuclear + 0.5800 58.00%
Hepatotoxicity - 0.5601 56.01%
skin sensitisation - 0.8295 82.95%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.7125 71.25%
Nephrotoxicity - 0.9649 96.49%
Acute Oral Toxicity (c) III 0.5502 55.02%
Estrogen receptor binding + 0.7673 76.73%
Androgen receptor binding + 0.7100 71.00%
Thyroid receptor binding - 0.5385 53.85%
Glucocorticoid receptor binding + 0.6702 67.02%
Aromatase binding + 0.6153 61.53%
PPAR gamma + 0.6801 68.01%
Honey bee toxicity - 0.7232 72.32%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9958 99.58%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2179 P04062 Beta-glucocerebrosidase 99.60% 85.31%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.80% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.58% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.99% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.12% 94.45%
CHEMBL2581 P07339 Cathepsin D 95.59% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.26% 85.14%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 94.90% 96.38%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.59% 95.56%
CHEMBL226 P30542 Adenosine A1 receptor 92.45% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.44% 97.09%
CHEMBL4227 P25090 Lipoxin A4 receptor 91.47% 100.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 89.97% 93.56%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 89.38% 94.08%
CHEMBL5028 O14672 ADAM10 87.93% 97.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.52% 89.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.99% 96.00%
CHEMBL340 P08684 Cytochrome P450 3A4 86.78% 91.19%
CHEMBL3401 O75469 Pregnane X receptor 86.42% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.18% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.53% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.34% 86.33%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.11% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 84.85% 92.50%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 83.48% 96.90%
CHEMBL211 P08172 Muscarinic acetylcholine receptor M2 83.13% 94.97%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 83.04% 94.62%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.38% 100.00%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 82.23% 94.23%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.84% 97.14%
CHEMBL2514 O95665 Neurotensin receptor 2 81.60% 100.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 80.09% 97.29%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 10723318
LOTUS LTS0082570
wikiData Q105025526