(3S,8R,9S,10R,12R,13S,14S,17S)-17-[(1S)-1-hydroxyethyl]-3-[(2R,4R,5R,6R)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy-10,13-dimethyl-2,3,4,7,8,9,11,12,15,16-decahydro-1H-cyclopenta[a]phenanthrene-12,14,17-triol

Details

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Internal ID 3c70f792-a35f-49e4-93b9-f618c5498736
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (3S,8R,9S,10R,12R,13S,14S,17S)-17-[(1S)-1-hydroxyethyl]-3-[(2R,4R,5R,6R)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy-10,13-dimethyl-2,3,4,7,8,9,11,12,15,16-decahydro-1H-cyclopenta[a]phenanthrene-12,14,17-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H46O8/c1-15-24(31)21(34-5)14-23(35-15)36-18-8-9-25(3)17(12-18)6-7-19-20(25)13-22(30)26(4)27(32,16(2)29)10-11-28(19,26)33/h6,15-16,18-24,29-33H,7-14H2,1-5H3/t15-,16+,18+,19-,20+,21-,22-,23+,24-,25+,26-,27-,28+/m1/s1
InChI Key CGFABGLHESTIPE-JLTGOWMJSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C28H46O8
Molecular Weight 510.70 g/mol
Exact Mass 510.31926842 g/mol
Topological Polar Surface Area (TPSA) 129.00 Ų
XlogP 1.10
Atomic LogP (AlogP) 2.04
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3S,8R,9S,10R,12R,13S,14S,17S)-17-[(1S)-1-hydroxyethyl]-3-[(2R,4R,5R,6R)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy-10,13-dimethyl-2,3,4,7,8,9,11,12,15,16-decahydro-1H-cyclopenta[a]phenanthrene-12,14,17-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8889 88.89%
Caco-2 - 0.7546 75.46%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.5927 59.27%
OATP2B1 inhibitior - 0.5754 57.54%
OATP1B1 inhibitior + 0.9137 91.37%
OATP1B3 inhibitior + 0.9207 92.07%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7821 78.21%
BSEP inhibitior - 0.5707 57.07%
P-glycoprotein inhibitior - 0.5210 52.10%
P-glycoprotein substrate + 0.6548 65.48%
CYP3A4 substrate + 0.7042 70.42%
CYP2C9 substrate - 0.7962 79.62%
CYP2D6 substrate - 0.8413 84.13%
CYP3A4 inhibition - 0.9078 90.78%
CYP2C9 inhibition - 0.8726 87.26%
CYP2C19 inhibition - 0.8450 84.50%
CYP2D6 inhibition - 0.9274 92.74%
CYP1A2 inhibition - 0.7689 76.89%
CYP2C8 inhibition + 0.4703 47.03%
CYP inhibitory promiscuity - 0.9375 93.75%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6213 62.13%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9566 95.66%
Skin irritation + 0.5000 50.00%
Skin corrosion - 0.9258 92.58%
Ames mutagenesis - 0.7900 79.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3601 36.01%
Micronuclear - 0.7700 77.00%
Hepatotoxicity - 0.6801 68.01%
skin sensitisation - 0.8565 85.65%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.8750 87.50%
Nephrotoxicity - 0.8553 85.53%
Acute Oral Toxicity (c) I 0.3263 32.63%
Estrogen receptor binding + 0.6627 66.27%
Androgen receptor binding + 0.7428 74.28%
Thyroid receptor binding - 0.5118 51.18%
Glucocorticoid receptor binding + 0.7324 73.24%
Aromatase binding + 0.6515 65.15%
PPAR gamma - 0.5549 55.49%
Honey bee toxicity - 0.6902 69.02%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9333 93.33%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.63% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.72% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.71% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 93.34% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.03% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 92.58% 95.89%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.03% 85.14%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.02% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.38% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 87.87% 97.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.31% 94.45%
CHEMBL4803 P29474 Nitric-oxide synthase, endothelial 86.31% 86.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.63% 89.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.53% 91.07%
CHEMBL2581 P07339 Cathepsin D 82.89% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.03% 86.33%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 81.44% 100.00%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 80.93% 91.03%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cynanchum formosanum

Cross-Links

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PubChem 162890040
LOTUS LTS0071135
wikiData Q104957596