Polymyxin Ile-E8

Details

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Internal ID a5c93e5c-e9d4-4605-b132-6b4da8d6df57
Taxonomy Organic Polymers > Polypeptides
IUPAC Name N-[4-amino-1-[[1-[[4-amino-1-oxo-1-[[6,9,18-tris(2-aminoethyl)-12-butan-2-yl-3-(1-hydroxyethyl)-15-(2-methylpropyl)-2,5,8,11,14,17,20-heptaoxo-1,4,7,10,13,16,19-heptazacyclotricos-21-yl]amino]butan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-1-oxobutan-2-yl]-7-methylnonanamide
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C54H102N16O13/c1-9-30(5)14-12-11-13-15-41(73)61-34(16-22-55)49(78)70-44(33(8)72)54(83)66-37(19-25-58)46(75)64-39-21-27-60-52(81)43(32(7)71)69-50(79)38(20-26-59)63-45(74)36(18-24-57)65-53(82)42(31(6)10-2)68-51(80)40(28-29(3)4)67-47(76)35(17-23-56)62-48(39)77/h29-40,42-44,71-72H,9-28,55-59H2,1-8H3,(H,60,81)(H,61,73)(H,62,77)(H,63,74)(H,64,75)(H,65,82)(H,66,83)(H,67,76)(H,68,80)(H,69,79)(H,70,78)
InChI Key ZQDODKJTNPWCKJ-UHFFFAOYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C54H102N16O13
Molecular Weight 1183.50 g/mol
Exact Mass 1182.78122737 g/mol
Topological Polar Surface Area (TPSA) 491.00 Ų
XlogP -2.20
Atomic LogP (AlogP) -5.05
H-Bond Acceptor 18
H-Bond Donor 18
Rotatable Bonds 30

Synonyms

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N-(3-Amino-1-((1-((3-amino-1-((6,9,18-tris(2-aminoethyl)-12-(butan-2-yl)-2,5,8,11,14,17,20-heptahydroxy-3-(1-hydroxyethyl)-15-(2-methylpropyl)-1,4,7,10,13,16,19-heptaazacyclotricosa-1,4,7,10,13,16,19-heptaen-21-yl)-C-hydroxycarbonimidoyl)propyl)-C-hydroxycarbonimidoyl)-2-hydroxypropyl)-C-hydroxycarbonimidoyl)propyl)-7-methylnonanimidate
N-(4-amino-1-((1-((4-amino-1-oxo-1-((6,9,18-tris(2-aminoethyl)-12-butan-2-yl-3-(1-hydroxyethyl)-15-(2-methylpropyl)-2,5,8,11,14,17,20-heptaoxo-1,4,7,10,13,16,19-heptazacyclotricos-21-yl)amino)butan-2-yl)amino)-3-hydroxy-1-oxobutan-2-yl)amino)-1-oxobutan-2-yl)-7-methylnonanamide
N-[3-Amino-1-({1-[(3-amino-1-{[6,9,18-tris(2-aminoethyl)-12-(butan-2-yl)-2,5,8,11,14,17,20-heptahydroxy-3-(1-hydroxyethyl)-15-(2-methylpropyl)-1,4,7,10,13,16,19-heptaazacyclotricosa-1,4,7,10,13,16,19-heptaen-21-yl]-C-hydroxycarbonimidoyl}propyl)-C-hydroxycarbonimidoyl]-2-hydroxypropyl}-C-hydroxycarbonimidoyl)propyl]-7-methylnonanimidate
RefChem:175180
CHEBI:218341

2D Structure

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2D Structure of Polymyxin Ile-E8

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6644 66.44%
Caco-2 - 0.8600 86.00%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.5232 52.32%
OATP2B1 inhibitior - 0.8613 86.13%
OATP1B1 inhibitior + 0.9137 91.37%
OATP1B3 inhibitior + 0.9041 90.41%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior + 0.9114 91.14%
P-glycoprotein inhibitior + 0.7405 74.05%
P-glycoprotein substrate + 0.8729 87.29%
CYP3A4 substrate + 0.6954 69.54%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7691 76.91%
CYP3A4 inhibition - 0.8879 88.79%
CYP2C9 inhibition - 0.9387 93.87%
CYP2C19 inhibition - 0.9139 91.39%
CYP2D6 inhibition - 0.9290 92.90%
CYP1A2 inhibition - 0.9372 93.72%
CYP2C8 inhibition + 0.5902 59.02%
CYP inhibitory promiscuity - 0.9937 99.37%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.8200 82.00%
Carcinogenicity (trinary) Non-required 0.6317 63.17%
Eye corrosion - 0.9824 98.24%
Eye irritation - 0.8961 89.61%
Skin irritation - 0.7712 77.12%
Skin corrosion - 0.9189 91.89%
Ames mutagenesis - 0.7700 77.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3873 38.73%
Micronuclear + 0.7400 74.00%
Hepatotoxicity - 0.7575 75.75%
skin sensitisation - 0.8776 87.76%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity + 0.8518 85.18%
Acute Oral Toxicity (c) III 0.7748 77.48%
Estrogen receptor binding + 0.7477 74.77%
Androgen receptor binding + 0.5991 59.91%
Thyroid receptor binding - 0.6569 65.69%
Glucocorticoid receptor binding + 0.6082 60.82%
Aromatase binding + 0.7101 71.01%
PPAR gamma + 0.7509 75.09%
Honey bee toxicity - 0.7898 78.98%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5124 51.24%
Fish aquatic toxicity - 0.6353 63.53%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.50% 98.95%
CHEMBL220 P22303 Acetylcholinesterase 99.35% 94.45%
CHEMBL3837 P07711 Cathepsin L 98.73% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.70% 96.09%
CHEMBL2094135 Q96BI3 Gamma-secretase 98.66% 98.05%
CHEMBL3137262 O60341 LSD1/CoREST complex 98.11% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.23% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 97.00% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.76% 94.45%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 95.34% 97.23%
CHEMBL4588 P22894 Matrix metalloproteinase 8 95.21% 94.66%
CHEMBL226 P30542 Adenosine A1 receptor 95.10% 95.93%
CHEMBL2492 P36544 Neuronal acetylcholine receptor protein alpha-7 subunit 94.89% 88.42%
CHEMBL4296 Q15858 Sodium channel protein type IX alpha subunit 94.89% 96.11%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 94.71% 90.71%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 94.14% 98.33%
CHEMBL1907589 P17787 Neuronal acetylcholine receptor; alpha4/beta2 94.07% 94.55%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 93.48% 96.47%
CHEMBL2208 P49137 MAP kinase-activated protein kinase 2 92.45% 95.20%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 92.07% 95.50%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 91.86% 95.00%
CHEMBL299 P17252 Protein kinase C alpha 90.87% 98.03%
CHEMBL4018 P49146 Neuropeptide Y receptor type 2 90.79% 98.94%
CHEMBL222 P23975 Norepinephrine transporter 90.75% 96.06%
CHEMBL4979 P13866 Sodium/glucose cotransporter 1 90.42% 98.24%
CHEMBL1801 P00747 Plasminogen 90.22% 92.44%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 90.20% 95.71%
CHEMBL1937 Q92769 Histone deacetylase 2 90.10% 94.75%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 89.64% 96.90%
CHEMBL3492 P49721 Proteasome Macropain subunit 88.99% 90.24%
CHEMBL4581 P52732 Kinesin-like protein 1 88.96% 93.18%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 88.95% 97.14%
CHEMBL1075317 P61964 WD repeat-containing protein 5 88.80% 96.33%
CHEMBL5103 Q969S8 Histone deacetylase 10 88.59% 90.08%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 88.37% 92.88%
CHEMBL2413 P32246 C-C chemokine receptor type 1 87.79% 89.50%
CHEMBL255 P29275 Adenosine A2b receptor 87.38% 98.59%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 86.80% 93.03%
CHEMBL3524 P56524 Histone deacetylase 4 86.70% 92.97%
CHEMBL3359 P21462 Formyl peptide receptor 1 86.39% 93.56%
CHEMBL2996 Q05655 Protein kinase C delta 85.54% 97.79%
CHEMBL5255 O00206 Toll-like receptor 4 84.99% 92.50%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 84.95% 97.29%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.80% 100.00%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 84.75% 91.03%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.18% 95.89%
CHEMBL325 Q13547 Histone deacetylase 1 84.08% 95.92%
CHEMBL2514 O95665 Neurotensin receptor 2 83.49% 100.00%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 83.42% 82.38%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 82.60% 100.00%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 82.13% 93.00%
CHEMBL1829 O15379 Histone deacetylase 3 81.33% 95.00%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 81.32% 94.80%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 80.43% 95.58%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 80.16% 82.86%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.15% 94.33%
CHEMBL4302 P08183 P-glycoprotein 1 80.04% 92.98%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 139587452
LOTUS LTS0271231
wikiData Q77566378