5'-O-methyladenosine

Details

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Internal ID 601e7339-a4c8-4981-b672-6e2fdfa24010
Taxonomy Nucleosides, nucleotides, and analogues > Purine nucleosides
IUPAC Name (2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-(methoxymethyl)oxolane-3,4-diol
SMILES (Canonical) COCC1C(C(C(O1)N2C=NC3=C(N=CN=C32)N)O)O
SMILES (Isomeric) COC[C@@H]1[C@H]([C@H]([C@@H](O1)N2C=NC3=C(N=CN=C32)N)O)O
InChI InChI=1S/C11H15N5O4/c1-19-2-5-7(17)8(18)11(20-5)16-4-15-6-9(12)13-3-14-10(6)16/h3-5,7-8,11,17-18H,2H2,1H3,(H2,12,13,14)/t5-,7-,8-,11-/m1/s1
InChI Key MLFJPVLRZZMIIP-IOSLPCCCSA-N
Popularity 10 references in papers

Physical and Chemical Properties

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Molecular Formula C11H15N5O4
Molecular Weight 281.27 g/mol
Exact Mass 281.11240398 g/mol
Topological Polar Surface Area (TPSA) 129.00 Ų
XlogP -1.90
Atomic LogP (AlogP) -1.33
H-Bond Acceptor 9
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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139468-46-5
(2R,3R,4S,5R)-2-(6-Amino-9H-purin-9-yl)-5-(methoxymethyl)tetrahydrofuran-3,4-diol
SCHEMBL41361
20649-45-0
CHEMBL2113536
MLFJPVLRZZMIIP-IOSLPCCCSA-N
DTXSID301315273
2-(6-Amino-purin-9-yl)-5-methoxymethyl-tetrahydro-furan-3,4-diol
(2R,3R,4S,5R)-2-(6-amino-9H-purin-9-yl)-5-(methoxymethyl)oxolane-3,4-diol
(2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-(methoxymethyl)tetrahydrofuran-3,4-diol

2D Structure

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2D Structure of 5'-O-methyladenosine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7780 77.80%
Caco-2 - 0.8354 83.54%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Lysosomes 0.2882 28.82%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9514 95.14%
OATP1B3 inhibitior + 0.9468 94.68%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9283 92.83%
P-glycoprotein inhibitior - 0.8862 88.62%
P-glycoprotein substrate - 0.8041 80.41%
CYP3A4 substrate - 0.5441 54.41%
CYP2C9 substrate - 0.8194 81.94%
CYP2D6 substrate - 0.8668 86.68%
CYP3A4 inhibition - 0.9480 94.80%
CYP2C9 inhibition - 0.8984 89.84%
CYP2C19 inhibition - 0.8743 87.43%
CYP2D6 inhibition - 0.9343 93.43%
CYP1A2 inhibition - 0.9305 93.05%
CYP2C8 inhibition - 0.7684 76.84%
CYP inhibitory promiscuity - 0.9604 96.04%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5882 58.82%
Eye corrosion - 0.9884 98.84%
Eye irritation - 0.9185 91.85%
Skin irritation - 0.7759 77.59%
Skin corrosion - 0.9364 93.64%
Ames mutagenesis - 0.7037 70.37%
Human Ether-a-go-go-Related Gene inhibition - 0.7127 71.27%
Micronuclear + 0.9700 97.00%
Hepatotoxicity - 0.6935 69.35%
skin sensitisation - 0.8707 87.07%
Respiratory toxicity + 0.9333 93.33%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 1.0000 100.00%
Nephrotoxicity - 0.8595 85.95%
Acute Oral Toxicity (c) III 0.7269 72.69%
Estrogen receptor binding - 0.6342 63.42%
Androgen receptor binding - 0.5192 51.92%
Thyroid receptor binding + 0.6617 66.17%
Glucocorticoid receptor binding - 0.5634 56.34%
Aromatase binding + 0.7500 75.00%
PPAR gamma + 0.5206 52.06%
Honey bee toxicity - 0.9308 93.08%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity - 0.8299 82.99%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL256 P0DMS8 Adenosine A3 receptor 40.3 nM
Ki
PMID: 11520205

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.25% 96.09%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 92.17% 80.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.61% 94.00%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 90.22% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.93% 86.33%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 87.32% 91.11%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 87.31% 96.67%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.25% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 86.98% 94.73%
CHEMBL3589 P55263 Adenosine kinase 86.87% 98.05%
CHEMBL226 P30542 Adenosine A1 receptor 86.44% 95.93%
CHEMBL3714130 P46095 G-protein coupled receptor 6 83.53% 97.36%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 82.90% 93.65%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 82.73% 95.48%
CHEMBL2243 O00519 Anandamide amidohydrolase 82.00% 97.53%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.22% 97.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.13% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acacia aulacocarpa
Anemonastrum flaccidum
Ardisia neriifolia
Aspidosperma subincanum
Cryptocarya aschersoniana
Eupatorium argentinum
Garcinia madruno
Guatteria ucayalina
Juniperus brevifolia
Lonicera japonica
Nelumbo nucifera
Peritassa compta
Psiadia dentata

Cross-Links

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PubChem 6480505
NPASS NPC219313
ChEMBL CHEMBL2113536
LOTUS LTS0028647
wikiData Q105166581