5-O-Demethylpaxanthonin

Details

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Internal ID 096d0775-2736-4bfb-b91e-eb059f300e15
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 2-[(1S,4S)-2,2-dimethyl-4-prop-1-en-2-ylcyclopentyl]-1,3,5,6-tetrahydroxyxanthen-9-one
SMILES (Canonical) CC(=C)C1CC(C(C1)(C)C)C2=C(C3=C(C=C2O)OC4=C(C3=O)C=CC(=C4O)O)O
SMILES (Isomeric) CC(=C)[C@H]1C[C@@H](C(C1)(C)C)C2=C(C3=C(C=C2O)OC4=C(C3=O)C=CC(=C4O)O)O
InChI InChI=1S/C23H24O6/c1-10(2)11-7-13(23(3,4)9-11)17-15(25)8-16-18(21(17)28)19(26)12-5-6-14(24)20(27)22(12)29-16/h5-6,8,11,13,24-25,27-28H,1,7,9H2,2-4H3/t11-,13+/m0/s1
InChI Key LYMUFMGSOHLCHO-WCQYABFASA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C23H24O6
Molecular Weight 396.40 g/mol
Exact Mass 396.15728848 g/mol
Topological Polar Surface Area (TPSA) 107.00 Ų
XlogP 5.70
Atomic LogP (AlogP) 4.86
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 2

Synonyms

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CHEBI:65742
1,3,5,6-tetrahydroxy-2-(2',2'-dimethyl-4'-isopropenyl)-cyclopentanylxanthone
2-[(1S,4S)-2,2-dimethyl-4-(prop-1-en-2-yl)cyclopentyl]-1,3,5,6-tetrahydroxy-9H-xanthen-9-one
Demethylpaxanthonin
CHEMBL513385
Q27134224
1,3,5,6-tetrahydroxy-2-[(1S,4S)-4-isopropenyl-2,2-dimethyl-cyclopentyl]xanthen-9-one
2-[(1S,4S)-2,2-dimethyl-4-prop-1-en-2-ylcyclopentyl]-1,3,5,6-tetrahydroxyxanthen-9-one
9H-Xanthen-9-one, 2-[(1S,4S)-2,2-dimethyl-4-(1-methylethenyl)cyclopentyl]-1,3,5,6-tetrahydroxy-

2D Structure

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2D Structure of 5-O-Demethylpaxanthonin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9687 96.87%
Caco-2 - 0.6416 64.16%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.6065 60.65%
OATP2B1 inhibitior + 0.5768 57.68%
OATP1B1 inhibitior + 0.9208 92.08%
OATP1B3 inhibitior + 0.9588 95.88%
MATE1 inhibitior - 0.7200 72.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.5962 59.62%
P-glycoprotein inhibitior - 0.5700 57.00%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.6382 63.82%
CYP2C9 substrate + 0.5955 59.55%
CYP2D6 substrate - 0.8405 84.05%
CYP3A4 inhibition - 0.5132 51.32%
CYP2C9 inhibition + 0.6261 62.61%
CYP2C19 inhibition + 0.6447 64.47%
CYP2D6 inhibition - 0.8212 82.12%
CYP1A2 inhibition + 0.6786 67.86%
CYP2C8 inhibition + 0.4628 46.28%
CYP inhibitory promiscuity + 0.7097 70.97%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6228 62.28%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.7477 74.77%
Skin irritation - 0.6895 68.95%
Skin corrosion - 0.9107 91.07%
Ames mutagenesis + 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3662 36.62%
Micronuclear - 0.6300 63.00%
Hepatotoxicity + 0.6045 60.45%
skin sensitisation - 0.7614 76.14%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity - 0.8653 86.53%
Acute Oral Toxicity (c) III 0.4295 42.95%
Estrogen receptor binding + 0.6945 69.45%
Androgen receptor binding + 0.7670 76.70%
Thyroid receptor binding - 0.5414 54.14%
Glucocorticoid receptor binding + 0.7502 75.02%
Aromatase binding + 0.6244 62.44%
PPAR gamma + 0.7881 78.81%
Honey bee toxicity - 0.8079 80.79%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.88% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 99.74% 91.49%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.18% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.79% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.67% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.85% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.39% 94.00%
CHEMBL2581 P07339 Cathepsin D 86.69% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.55% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.92% 95.89%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.41% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.32% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.66% 86.33%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 81.62% 97.33%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 81.00% 94.42%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 80.50% 85.11%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hypericum roeperianum
Hypericum styphelioides

Cross-Links

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PubChem 15958474
NPASS NPC187491
LOTUS LTS0275931
wikiData Q27134224