5-hydroxy-7-(hydroxymethyl)-4,4a,5,7a-tetrahydro-1H-cyclopenta[c]pyran-3-one

Details

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Internal ID 787d9247-44fb-4678-95e0-12d0f7e31ff6
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones
IUPAC Name 5-hydroxy-7-(hydroxymethyl)-4,4a,5,7a-tetrahydro-1H-cyclopenta[c]pyran-3-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C9H12O4/c10-3-5-1-8(11)6-2-9(12)13-4-7(5)6/h1,6-8,10-11H,2-4H2
InChI Key IGAJHBXTLAVHLX-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C9H12O4
Molecular Weight 184.19 g/mol
Exact Mass 184.07355886 g/mol
Topological Polar Surface Area (TPSA) 66.80 Ų
XlogP -1.40
Atomic LogP (AlogP) -0.54
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 5-hydroxy-7-(hydroxymethyl)-4,4a,5,7a-tetrahydro-1H-cyclopenta[c]pyran-3-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9410 94.10%
Caco-2 - 0.8241 82.41%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.7424 74.24%
OATP2B1 inhibitior - 0.8489 84.89%
OATP1B1 inhibitior + 0.9031 90.31%
OATP1B3 inhibitior + 0.9609 96.09%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9558 95.58%
P-glycoprotein inhibitior - 0.9852 98.52%
P-glycoprotein substrate - 0.8688 86.88%
CYP3A4 substrate - 0.5909 59.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8073 80.73%
CYP3A4 inhibition - 0.9293 92.93%
CYP2C9 inhibition - 0.9184 91.84%
CYP2C19 inhibition - 0.8157 81.57%
CYP2D6 inhibition - 0.9046 90.46%
CYP1A2 inhibition - 0.8116 81.16%
CYP2C8 inhibition - 0.9538 95.38%
CYP inhibitory promiscuity - 0.8702 87.02%
UGT catelyzed + 1.0000 100.00%
Carcinogenicity (binary) - 0.9513 95.13%
Carcinogenicity (trinary) Non-required 0.6902 69.02%
Eye corrosion - 0.9550 95.50%
Eye irritation + 0.5859 58.59%
Skin irritation - 0.7805 78.05%
Skin corrosion - 0.9380 93.80%
Ames mutagenesis + 0.6122 61.22%
Human Ether-a-go-go-Related Gene inhibition - 0.7314 73.14%
Micronuclear - 0.7600 76.00%
Hepatotoxicity - 0.5776 57.76%
skin sensitisation - 0.8212 82.12%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.5778 57.78%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.5912 59.12%
Acute Oral Toxicity (c) III 0.5238 52.38%
Estrogen receptor binding - 0.7857 78.57%
Androgen receptor binding - 0.7191 71.91%
Thyroid receptor binding - 0.8696 86.96%
Glucocorticoid receptor binding - 0.5743 57.43%
Aromatase binding - 0.8489 84.89%
PPAR gamma - 0.7418 74.18%
Honey bee toxicity - 0.8073 80.73%
Biodegradation + 0.5750 57.50%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity + 0.6931 69.31%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.00% 91.11%
CHEMBL2581 P07339 Cathepsin D 90.72% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.28% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.83% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.81% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.39% 100.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.09% 86.92%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.08% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.91% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.66% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Pedicularis chinensis
Scrophularia buergeriana

Cross-Links

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PubChem 85294993
LOTUS LTS0227488
wikiData Q105112505