5'-Deoxyadenosine

Details

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Internal ID 955fdd25-efcc-49bb-b299-ddf85a9e19be
Taxonomy Nucleosides, nucleotides, and analogues > 5-deoxyribonucleosides
IUPAC Name (2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-methyloxolane-3,4-diol
SMILES (Canonical) CC1C(C(C(O1)N2C=NC3=C(N=CN=C32)N)O)O
SMILES (Isomeric) C[C@@H]1[C@H]([C@H]([C@@H](O1)N2C=NC3=C(N=CN=C32)N)O)O
InChI InChI=1S/C10H13N5O3/c1-4-6(16)7(17)10(18-4)15-3-14-5-8(11)12-2-13-9(5)15/h2-4,6-7,10,16-17H,1H3,(H2,11,12,13)/t4-,6-,7-,10-/m1/s1
InChI Key XGYIMTFOTBMPFP-KQYNXXCUSA-N
Popularity 522 references in papers

Physical and Chemical Properties

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Molecular Formula C10H13N5O3
Molecular Weight 251.24 g/mol
Exact Mass 251.10183929 g/mol
Topological Polar Surface Area (TPSA) 119.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -0.95
H-Bond Acceptor 8
H-Bond Donor 3
Rotatable Bonds 1

Synonyms

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4754-39-6
ADENOSINE, 5'-DEOXY-
CHEBI:17319
2U0TYC8Y5A
(2R,3R,4S,5R)-2-(6-Amino-9H-purin-9-yl)-5-methyltetrahydrofuran-3,4-diol
5AD
(2R,3R,4S,5R)-2-(6-aminopurin-9-yl)-5-methyl-tetrahydrofuran-3,4-diol
5 inverted exclamation marka-dAdo
5?-Deoxyadenosine
5'-deoxy-adenosine
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 5'-Deoxyadenosine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9377 93.77%
Caco-2 - 0.7456 74.56%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.3363 33.63%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9614 96.14%
OATP1B3 inhibitior + 0.9499 94.99%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9543 95.43%
P-glycoprotein inhibitior - 0.9108 91.08%
P-glycoprotein substrate - 0.7999 79.99%
CYP3A4 substrate - 0.6201 62.01%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8773 87.73%
CYP3A4 inhibition - 0.9194 91.94%
CYP2C9 inhibition - 0.8960 89.60%
CYP2C19 inhibition - 0.8260 82.60%
CYP2D6 inhibition - 0.9215 92.15%
CYP1A2 inhibition - 0.9200 92.00%
CYP2C8 inhibition - 0.9128 91.28%
CYP inhibitory promiscuity - 0.9322 93.22%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.5539 55.39%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.9205 92.05%
Skin irritation - 0.7777 77.77%
Skin corrosion - 0.9467 94.67%
Ames mutagenesis - 0.5637 56.37%
Human Ether-a-go-go-Related Gene inhibition - 0.8422 84.22%
Micronuclear + 0.9900 99.00%
Hepatotoxicity - 0.5360 53.60%
skin sensitisation - 0.8982 89.82%
Respiratory toxicity + 0.8889 88.89%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.8345 83.45%
Acute Oral Toxicity (c) III 0.5915 59.15%
Estrogen receptor binding - 0.5481 54.81%
Androgen receptor binding - 0.6195 61.95%
Thyroid receptor binding + 0.5180 51.80%
Glucocorticoid receptor binding - 0.5441 54.41%
Aromatase binding + 0.7583 75.83%
PPAR gamma + 0.5307 53.07%
Honey bee toxicity - 0.9529 95.29%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity - 0.8406 84.06%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3589 P55263 Adenosine kinase 97.74% 98.05%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.94% 96.09%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 95.30% 100.00%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 91.59% 95.48%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.01% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 87.02% 94.73%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 86.68% 80.33%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 84.73% 98.46%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 84.59% 96.67%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.37% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.28% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.09% 95.89%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 82.78% 93.65%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.73% 97.36%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.53% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 439182
LOTUS LTS0011251
wikiData Q27102319