5-Demethylsimmondsin

Details

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Internal ID 855e9de3-5440-483d-9b8b-61a88dc2f7cb
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name (2Z)-2-[(2S,3S,4S,6R)-2,4-dihydroxy-3-methoxy-6-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxycyclohexylidene]acetonitrile
SMILES (Canonical) COC1C(CC(C(=CC#N)C1O)OC2C(C(C(C(O2)CO)O)O)O)O
SMILES (Isomeric) CO[C@H]1[C@H](C[C@H](/C(=C\C#N)/[C@@H]1O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O
InChI InChI=1S/C15H23NO9/c1-23-14-7(18)4-8(6(2-3-16)10(14)19)24-15-13(22)12(21)11(20)9(5-17)25-15/h2,7-15,17-22H,4-5H2,1H3/b6-2+/t7-,8+,9+,10-,11+,12-,13+,14-,15+/m0/s1
InChI Key SDYUFOBSNZFKRM-YODNPNMUSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C15H23NO9
Molecular Weight 361.34 g/mol
Exact Mass 361.13728131 g/mol
Topological Polar Surface Area (TPSA) 173.00 Ų
XlogP -3.80
Atomic LogP (AlogP) -3.24
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 4

Synonyms

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DTXSID101315041
135105-75-8

2D Structure

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2D Structure of 5-Demethylsimmondsin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8051 80.51%
Caco-2 - 0.9045 90.45%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.5730 57.30%
OATP2B1 inhibitior - 0.8592 85.92%
OATP1B1 inhibitior + 0.8716 87.16%
OATP1B3 inhibitior + 0.9570 95.70%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.9439 94.39%
P-glycoprotein inhibitior - 0.8735 87.35%
P-glycoprotein substrate - 0.8341 83.41%
CYP3A4 substrate + 0.5774 57.74%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8350 83.50%
CYP3A4 inhibition - 0.8570 85.70%
CYP2C9 inhibition - 0.8614 86.14%
CYP2C19 inhibition - 0.8553 85.53%
CYP2D6 inhibition - 0.9029 90.29%
CYP1A2 inhibition - 0.8595 85.95%
CYP2C8 inhibition - 0.8183 81.83%
CYP inhibitory promiscuity - 0.7256 72.56%
UGT catelyzed + 1.0000 100.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7185 71.85%
Eye corrosion - 0.9883 98.83%
Eye irritation - 0.9834 98.34%
Skin irritation - 0.8195 81.95%
Skin corrosion - 0.9506 95.06%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6695 66.95%
Micronuclear - 0.6600 66.00%
Hepatotoxicity - 0.7091 70.91%
skin sensitisation - 0.8656 86.56%
Respiratory toxicity - 0.6333 63.33%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.6157 61.57%
Acute Oral Toxicity (c) III 0.6108 61.08%
Estrogen receptor binding - 0.4906 49.06%
Androgen receptor binding - 0.6987 69.87%
Thyroid receptor binding + 0.6049 60.49%
Glucocorticoid receptor binding - 0.6052 60.52%
Aromatase binding + 0.5692 56.92%
PPAR gamma - 0.5000 50.00%
Honey bee toxicity - 0.6493 64.93%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity - 0.8569 85.69%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.20% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.85% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 93.09% 95.93%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.21% 85.14%
CHEMBL1871 P10275 Androgen Receptor 89.85% 96.43%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 89.50% 95.83%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.06% 97.09%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.91% 86.92%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.95% 96.00%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 82.38% 95.58%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.87% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.48% 95.89%
CHEMBL2581 P07339 Cathepsin D 80.44% 98.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Simmondsia chinensis

Cross-Links

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PubChem 101948147
LOTUS LTS0183738
wikiData Q104253429