1,4,6-Trihydroxy-3-methoxy-2-(3-methyl-2-butenyl)-5-(1,1-dimethyl-prop-2-enyl)xanthone

Details

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Internal ID b2055e13-8320-4a3c-88b1-80d18b2ce0ab
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > 2-prenylated xanthones
IUPAC Name 1,4,6-trihydroxy-3-methoxy-5-(2-methylbut-3-en-2-yl)-2-(3-methylbut-2-enyl)xanthen-9-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C24H26O6/c1-7-24(4,5)17-15(25)11-10-13-18(26)16-19(27)14(9-8-12(2)3)22(29-6)20(28)23(16)30-21(13)17/h7-8,10-11,25,27-28H,1,9H2,2-6H3
InChI Key RHYDKWXOGNKPQK-UHFFFAOYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C24H26O6
Molecular Weight 410.50 g/mol
Exact Mass 410.17293854 g/mol
Topological Polar Surface Area (TPSA) 96.20 Ų
XlogP 6.30
Atomic LogP (AlogP) 5.04
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 5

Synonyms

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5-(1,1-dimethylallyl)-1,4,6-trihydroxy-3-methoxy-2-(3-methylbut-2-enyl)xanthen-9-one

2D Structure

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2D Structure of 1,4,6-Trihydroxy-3-methoxy-2-(3-methyl-2-butenyl)-5-(1,1-dimethyl-prop-2-enyl)xanthone

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9791 97.91%
Caco-2 + 0.5000 50.00%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.5982 59.82%
OATP2B1 inhibitior - 0.7009 70.09%
OATP1B1 inhibitior + 0.8909 89.09%
OATP1B3 inhibitior + 0.9022 90.22%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.5630 56.30%
P-glycoprotein inhibitior + 0.6545 65.45%
P-glycoprotein substrate - 0.6800 68.00%
CYP3A4 substrate + 0.6037 60.37%
CYP2C9 substrate - 0.5940 59.40%
CYP2D6 substrate - 0.8219 82.19%
CYP3A4 inhibition - 0.7455 74.55%
CYP2C9 inhibition + 0.7969 79.69%
CYP2C19 inhibition + 0.8874 88.74%
CYP2D6 inhibition - 0.5230 52.30%
CYP1A2 inhibition + 0.8147 81.47%
CYP2C8 inhibition + 0.5835 58.35%
CYP inhibitory promiscuity + 0.7690 76.90%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7081 70.81%
Eye corrosion - 0.9889 98.89%
Eye irritation + 0.5690 56.90%
Skin irritation - 0.7396 73.96%
Skin corrosion - 0.9279 92.79%
Ames mutagenesis + 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4856 48.56%
Micronuclear - 0.5900 59.00%
Hepatotoxicity + 0.6875 68.75%
skin sensitisation - 0.7488 74.88%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.7305 73.05%
Acute Oral Toxicity (c) III 0.6572 65.72%
Estrogen receptor binding + 0.8201 82.01%
Androgen receptor binding + 0.5851 58.51%
Thyroid receptor binding + 0.6698 66.98%
Glucocorticoid receptor binding + 0.7785 77.85%
Aromatase binding + 0.6191 61.91%
PPAR gamma + 0.8349 83.49%
Honey bee toxicity - 0.7553 75.53%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9941 99.41%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.45% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 97.95% 91.49%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 95.50% 89.34%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.37% 94.45%
CHEMBL2581 P07339 Cathepsin D 95.18% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.64% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 91.26% 94.73%
CHEMBL1163101 O75460 Serine/threonine-protein kinase/endoribonuclease IRE1 90.77% 98.11%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 89.98% 80.78%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.77% 94.00%
CHEMBL3192 Q9BY41 Histone deacetylase 8 89.36% 93.99%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.88% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.12% 89.00%
CHEMBL215 P09917 Arachidonate 5-lipoxygenase 86.62% 92.68%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 83.47% 85.30%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.09% 99.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.04% 99.23%
CHEMBL1937 Q92769 Histone deacetylase 2 80.63% 94.75%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia buchneri

Cross-Links

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PubChem 46894020
LOTUS LTS0089168
wikiData Q105236699