(1R,4S,5R,8S,9R,10R,11S,12S,13S,16S)-9,12-dihydroxy-4,11,15-trimethyl-13-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,7-dioxapentacyclo[8.8.0.01,5.04,8.011,16]octadec-14-ene-6,18-dione

Details

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Internal ID deb8f41e-0776-4234-8691-5212fc4a7160
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Quassinoids
IUPAC Name (1R,4S,5R,8S,9R,10R,11S,12S,13S,16S)-9,12-dihydroxy-4,11,15-trimethyl-13-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,7-dioxapentacyclo[8.8.0.01,5.04,8.011,16]octadec-14-ene-6,18-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H34O12/c1-8-4-10(35-22-15(30)14(29)13(28)11(6-26)36-22)19(32)23(2)9(8)5-12(27)25-7-34-24(3)18(25)21(33)37-20(24)16(31)17(23)25/h4,9-11,13-20,22,26,28-32H,5-7H2,1-3H3/t9-,10-,11+,13+,14-,15+,16+,17+,18-,19+,20-,22+,23-,24-,25+/m0/s1
InChI Key XKHBVJKBHHZGGQ-FUDFEDLXSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C25H34O12
Molecular Weight 526.50 g/mol
Exact Mass 526.20502652 g/mol
Topological Polar Surface Area (TPSA) 192.00 Ų
XlogP -3.30
Atomic LogP (AlogP) -2.60
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1R,4S,5R,8S,9R,10R,11S,12S,13S,16S)-9,12-dihydroxy-4,11,15-trimethyl-13-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,7-dioxapentacyclo[8.8.0.01,5.04,8.011,16]octadec-14-ene-6,18-dione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6603 66.03%
Caco-2 - 0.8608 86.08%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.7395 73.95%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8714 87.14%
OATP1B3 inhibitior + 0.9463 94.63%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.8591 85.91%
P-glycoprotein inhibitior - 0.6249 62.49%
P-glycoprotein substrate + 0.5086 50.86%
CYP3A4 substrate + 0.6672 66.72%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8857 88.57%
CYP3A4 inhibition - 0.8986 89.86%
CYP2C9 inhibition - 0.8854 88.54%
CYP2C19 inhibition - 0.8787 87.87%
CYP2D6 inhibition - 0.9466 94.66%
CYP1A2 inhibition - 0.8897 88.97%
CYP2C8 inhibition - 0.6859 68.59%
CYP inhibitory promiscuity - 0.8597 85.97%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6153 61.53%
Eye corrosion - 0.9881 98.81%
Eye irritation - 0.9397 93.97%
Skin irritation - 0.6601 66.01%
Skin corrosion - 0.9336 93.36%
Ames mutagenesis - 0.6654 66.54%
Human Ether-a-go-go-Related Gene inhibition - 0.6384 63.84%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.6731 67.31%
skin sensitisation - 0.8726 87.26%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity + 0.7871 78.71%
Acute Oral Toxicity (c) III 0.5628 56.28%
Estrogen receptor binding + 0.6910 69.10%
Androgen receptor binding + 0.6935 69.35%
Thyroid receptor binding - 0.5631 56.31%
Glucocorticoid receptor binding + 0.6468 64.68%
Aromatase binding + 0.6694 66.94%
PPAR gamma + 0.5574 55.74%
Honey bee toxicity - 0.6361 63.61%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.9342 93.42%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.25% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.56% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.64% 85.14%
CHEMBL2581 P07339 Cathepsin D 91.97% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.10% 94.00%
CHEMBL3401 O75469 Pregnane X receptor 88.49% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.73% 99.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.40% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.95% 95.56%
CHEMBL3714130 P46095 G-protein coupled receptor 6 83.81% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.68% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 82.95% 94.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.30% 89.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.48% 91.24%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.04% 93.04%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Samadera indica

Cross-Links

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PubChem 102585875
LOTUS LTS0195816
wikiData Q105329472