(2R,3S,4R,5R,6S)-2-[(2R,3S,4R,5S)-5-hydroxy-2-[(1S,2S,4S,6S,7R,8R,9S,12S,13S,14S,16R)-16-hydroxy-7,9,13-trimethyl-5'-methylidenespiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-4-[(2R,3S,4R,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

Top
Internal ID 7bfebba5-84b9-43ba-ac76-a404c3d70e68
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3S,4R,5R,6S)-2-[(2R,3S,4R,5S)-5-hydroxy-2-[(1S,2S,4S,6S,7R,8R,9S,12S,13S,14S,16R)-16-hydroxy-7,9,13-trimethyl-5'-methylidenespiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-4-[(2R,3S,4R,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C2C(CC3C2(CCC4C3CC=C5C4(C(CC(C5)O)OC6C(C(C(CO6)O)OC7C(C(C(CO7)O)O)O)OC8C(C(C(C(O8)C)O)O)O)C)C)OC19CCC(=C)CO9
SMILES (Isomeric) C[C@@H]1[C@H]2[C@H](C[C@@H]3[C@@]2(CC[C@H]4[C@H]3CC=C5[C@]4([C@H](C[C@@H](C5)O)O[C@@H]6[C@H]([C@@H]([C@H](CO6)O)O[C@@H]7[C@H]([C@@H]([C@H](CO7)O)O)O)O[C@@H]8[C@H]([C@@H]([C@H]([C@@H](O8)C)O)O)O)C)C)O[C@@]19CCC(=C)CO9
InChI InChI=1S/C43H66O16/c1-18-8-11-43(54-15-18)19(2)30-28(59-43)14-25-23-7-6-21-12-22(44)13-29(42(21,5)24(23)9-10-41(25,30)4)56-40-37(58-39-35(51)33(49)31(47)20(3)55-39)36(27(46)17-53-40)57-38-34(50)32(48)26(45)16-52-38/h6,19-20,22-40,44-51H,1,7-17H2,2-5H3/t19-,20+,22-,23-,24+,25+,26+,27+,28+,29+,30+,31+,32-,33-,34+,35+,36-,37+,38-,39-,40-,41+,42-,43+/m1/s1
InChI Key KRNSPGCTUAIFKQ-KNIAYLCASA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C43H66O16
Molecular Weight 839.00 g/mol
Exact Mass 838.43508601 g/mol
Topological Polar Surface Area (TPSA) 236.00 Ų
XlogP -0.10
Atomic LogP (AlogP) 0.38
H-Bond Acceptor 16
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,3S,4R,5R,6S)-2-[(2R,3S,4R,5S)-5-hydroxy-2-[(1S,2S,4S,6S,7R,8R,9S,12S,13S,14S,16R)-16-hydroxy-7,9,13-trimethyl-5'-methylidenespiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-4-[(2R,3S,4R,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8175 81.75%
Caco-2 - 0.8834 88.34%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7013 70.13%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8611 86.11%
OATP1B3 inhibitior + 0.9190 91.90%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.6667 66.67%
P-glycoprotein inhibitior + 0.7253 72.53%
P-glycoprotein substrate + 0.6702 67.02%
CYP3A4 substrate + 0.7573 75.73%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8129 81.29%
CYP3A4 inhibition - 0.9451 94.51%
CYP2C9 inhibition - 0.9000 90.00%
CYP2C19 inhibition - 0.9020 90.20%
CYP2D6 inhibition - 0.9286 92.86%
CYP1A2 inhibition - 0.8869 88.69%
CYP2C8 inhibition + 0.7752 77.52%
CYP inhibitory promiscuity - 0.9512 95.12%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5237 52.37%
Eye corrosion - 0.9878 98.78%
Eye irritation - 0.9170 91.70%
Skin irritation + 0.4941 49.41%
Skin corrosion - 0.9346 93.46%
Ames mutagenesis - 0.6654 66.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7372 73.72%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.6445 64.45%
skin sensitisation - 0.8895 88.95%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity - 0.8861 88.61%
Acute Oral Toxicity (c) I 0.4479 44.79%
Estrogen receptor binding + 0.7938 79.38%
Androgen receptor binding + 0.7275 72.75%
Thyroid receptor binding - 0.6117 61.17%
Glucocorticoid receptor binding + 0.5483 54.83%
Aromatase binding + 0.6971 69.71%
PPAR gamma + 0.6974 69.74%
Honey bee toxicity - 0.5861 58.61%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9746 97.46%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.37% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.66% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 97.33% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.56% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.30% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.47% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.18% 97.09%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.28% 95.89%
CHEMBL2581 P07339 Cathepsin D 85.79% 98.95%
CHEMBL332 P03956 Matrix metalloproteinase-1 85.44% 94.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.19% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.01% 94.45%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.86% 92.94%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 83.47% 89.05%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.47% 95.89%
CHEMBL5028 O14672 ADAM10 83.33% 97.50%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.14% 92.62%
CHEMBL259 P32245 Melanocortin receptor 4 81.03% 95.38%
CHEMBL221 P23219 Cyclooxygenase-1 80.90% 90.17%
CHEMBL1871 P10275 Androgen Receptor 80.75% 96.43%
CHEMBL1914 P06276 Butyrylcholinesterase 80.48% 95.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Beaucarnea recurvata

Cross-Links

Top
PubChem 162898190
LOTUS LTS0017730
wikiData Q105145130