methyl (1S,4aS,5R,7S,7aS)-7-hydroxy-5,7-dimethyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylate

Details

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Internal ID 0733f850-53c3-4c30-b61e-2ffa2ff686fc
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1S,4aS,5R,7S,7aS)-7-hydroxy-5,7-dimethyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C18H28O10/c1-7-4-18(2,24)11-10(7)8(15(23)25-3)6-26-16(11)28-17-14(22)13(21)12(20)9(5-19)27-17/h6-7,9-14,16-17,19-22,24H,4-5H2,1-3H3/t7-,9-,10-,11-,12-,13+,14-,16+,17+,18+/m1/s1
InChI Key LKEDDJNDLLFHTN-FMBBYTRZSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C18H28O10
Molecular Weight 404.40 g/mol
Exact Mass 404.16824709 g/mol
Topological Polar Surface Area (TPSA) 155.00 Ų
XlogP -1.20
Atomic LogP (AlogP) -1.76
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1S,4aS,5R,7S,7aS)-7-hydroxy-5,7-dimethyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4a,5,6,7a-tetrahydro-1H-cyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7126 71.26%
Caco-2 - 0.8135 81.35%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.6065 60.65%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8039 80.39%
OATP1B3 inhibitior + 0.9261 92.61%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.8857 88.57%
P-glycoprotein inhibitior - 0.8188 81.88%
P-glycoprotein substrate - 0.7490 74.90%
CYP3A4 substrate + 0.6470 64.70%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8720 87.20%
CYP3A4 inhibition - 0.9139 91.39%
CYP2C9 inhibition - 0.9219 92.19%
CYP2C19 inhibition - 0.9009 90.09%
CYP2D6 inhibition - 0.9194 91.94%
CYP1A2 inhibition - 0.9103 91.03%
CYP2C8 inhibition - 0.7025 70.25%
CYP inhibitory promiscuity - 0.8772 87.72%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6249 62.49%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9753 97.53%
Skin irritation - 0.6947 69.47%
Skin corrosion - 0.9482 94.82%
Ames mutagenesis - 0.5137 51.37%
Human Ether-a-go-go-Related Gene inhibition - 0.5666 56.66%
Micronuclear - 0.7000 70.00%
Hepatotoxicity - 0.8098 80.98%
skin sensitisation - 0.8637 86.37%
Respiratory toxicity + 0.6778 67.78%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity + 0.5000 50.00%
Acute Oral Toxicity (c) III 0.4480 44.80%
Estrogen receptor binding - 0.4755 47.55%
Androgen receptor binding - 0.5257 52.57%
Thyroid receptor binding - 0.5588 55.88%
Glucocorticoid receptor binding - 0.6543 65.43%
Aromatase binding - 0.5399 53.99%
PPAR gamma - 0.5385 53.85%
Honey bee toxicity - 0.7791 77.91%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity - 0.4412 44.12%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.03% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.32% 91.11%
CHEMBL4208 P20618 Proteasome component C5 88.44% 90.00%
CHEMBL221 P23219 Cyclooxygenase-1 88.38% 90.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.13% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.23% 97.09%
CHEMBL5255 O00206 Toll-like receptor 4 83.86% 92.50%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.39% 85.14%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.77% 99.17%
CHEMBL218 P21554 Cannabinoid CB1 receptor 81.69% 96.61%
CHEMBL3401 O75469 Pregnane X receptor 80.50% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Pedicularis densispica

Cross-Links

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PubChem 162877060
LOTUS LTS0172640
wikiData Q105153022