(2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,7R,8S,8aS,9R,10R,12aS,14aR,14bR)-7,8,9,10-tetrahydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxane-2-carboxylic acid

Details

Top
Internal ID 4f208ce6-53db-4f35-8670-abe370860fce
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,7R,8S,8aS,9R,10R,12aS,14aR,14bR)-7,8,9,10-tetrahydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxane-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C52H84O25/c1-47(2)14-20-19-8-9-25-49(5)12-11-26(48(3,4)24(49)10-13-50(25,6)51(19,7)39(65)41(67)52(20,18-55)40(66)38(47)64)73-46-37(77-45-33(63)30(60)28(58)22(15-53)71-45)35(74-43-31(61)27(57)21(56)17-70-43)34(36(76-46)42(68)69)75-44-32(62)29(59)23(16-54)72-44/h8,20-41,43-46,53-67H,9-18H2,1-7H3,(H,68,69)/t20-,21-,22+,23-,24-,25+,26-,27-,28+,29-,30-,31+,32+,33+,34-,35-,36-,37+,38-,39-,40-,41+,43-,44-,45-,46+,49-,50+,51-,52+/m0/s1
InChI Key ASYMVFZOBDRASD-WNACIVBISA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C52H84O25
Molecular Weight 1109.20 g/mol
Exact Mass 1108.53016816 g/mol
Topological Polar Surface Area (TPSA) 415.00 Ų
XlogP -2.30
Atomic LogP (AlogP) -4.31
H-Bond Acceptor 24
H-Bond Donor 16
Rotatable Bonds 12

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,7R,8S,8aS,9R,10R,12aS,14aR,14bR)-7,8,9,10-tetrahydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxane-2-carboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8593 85.93%
Caco-2 - 0.8917 89.17%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.8538 85.38%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7659 76.59%
OATP1B3 inhibitior - 0.2138 21.38%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.8278 82.78%
P-glycoprotein inhibitior + 0.7476 74.76%
P-glycoprotein substrate - 0.5955 59.55%
CYP3A4 substrate + 0.7366 73.66%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8798 87.98%
CYP3A4 inhibition - 0.9081 90.81%
CYP2C9 inhibition - 0.8652 86.52%
CYP2C19 inhibition - 0.9198 91.98%
CYP2D6 inhibition - 0.9299 92.99%
CYP1A2 inhibition - 0.9086 90.86%
CYP2C8 inhibition + 0.7112 71.12%
CYP inhibitory promiscuity - 0.9357 93.57%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5124 51.24%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9021 90.21%
Skin irritation - 0.5174 51.74%
Skin corrosion - 0.9392 93.92%
Ames mutagenesis - 0.6700 67.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7187 71.87%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.8841 88.41%
skin sensitisation - 0.9021 90.21%
Respiratory toxicity - 0.5889 58.89%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.8839 88.39%
Acute Oral Toxicity (c) III 0.6216 62.16%
Estrogen receptor binding + 0.7916 79.16%
Androgen receptor binding + 0.7605 76.05%
Thyroid receptor binding - 0.5318 53.18%
Glucocorticoid receptor binding + 0.7112 71.12%
Aromatase binding + 0.6166 61.66%
PPAR gamma + 0.7921 79.21%
Honey bee toxicity - 0.7087 70.87%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9565 95.65%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.06% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.44% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.79% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.33% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.25% 97.09%
CHEMBL226 P30542 Adenosine A1 receptor 88.41% 95.93%
CHEMBL218 P21554 Cannabinoid CB1 receptor 87.68% 96.61%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.61% 95.89%
CHEMBL2581 P07339 Cathepsin D 86.19% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.96% 86.33%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 85.67% 97.33%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.21% 96.21%
CHEMBL4208 P20618 Proteasome component C5 84.80% 90.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.86% 91.07%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.82% 99.17%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 82.59% 96.77%
CHEMBL5028 O14672 ADAM10 81.08% 97.50%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.46% 93.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.40% 100.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Pittosporum tobira

Cross-Links

Top
PubChem 163013200
LOTUS LTS0005362
wikiData Q104918193