methyl (1S,4aR,7aR)-4a-hydroxy-1-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-7-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate

Details

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Internal ID 8700bcdb-9d63-4222-8809-49eb843900bc
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1S,4aR,7aR)-4a-hydroxy-1-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-7-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate
SMILES (Canonical) COC(=O)C1=COC(C2C1(CC=C2COC3C(C(C(C(O3)CO)O)O)O)O)OC4C(C(C(C(O4)CO)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@H]([C@H]2[C@@]1(CC=C2CO[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O
InChI InChI=1S/C23H34O16/c1-34-19(32)9-7-36-20(39-22-18(31)16(29)14(27)11(5-25)38-22)12-8(2-3-23(9,12)33)6-35-21-17(30)15(28)13(26)10(4-24)37-21/h2,7,10-18,20-22,24-31,33H,3-6H2,1H3/t10-,11-,12+,13-,14-,15+,16+,17-,18-,20+,21-,22+,23+/m1/s1
InChI Key AKTHOIDCOGDWER-CCAZCNPQSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C23H34O16
Molecular Weight 566.50 g/mol
Exact Mass 566.18468499 g/mol
Topological Polar Surface Area (TPSA) 255.00 Ų
XlogP -4.50
Atomic LogP (AlogP) -5.29
H-Bond Acceptor 16
H-Bond Donor 9
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1S,4aR,7aR)-4a-hydroxy-1-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-7-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5830 58.30%
Caco-2 - 0.8886 88.86%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.7181 71.81%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8269 82.69%
OATP1B3 inhibitior + 0.9561 95.61%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.7263 72.63%
P-glycoprotein inhibitior - 0.6234 62.34%
P-glycoprotein substrate - 0.7146 71.46%
CYP3A4 substrate + 0.6478 64.78%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8627 86.27%
CYP3A4 inhibition - 0.9781 97.81%
CYP2C9 inhibition - 0.9398 93.98%
CYP2C19 inhibition - 0.8545 85.45%
CYP2D6 inhibition - 0.9105 91.05%
CYP1A2 inhibition - 0.9150 91.50%
CYP2C8 inhibition - 0.5665 56.65%
CYP inhibitory promiscuity - 0.9294 92.94%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6510 65.10%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.9330 93.30%
Skin irritation - 0.7602 76.02%
Skin corrosion - 0.9511 95.11%
Ames mutagenesis - 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7475 74.75%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.7199 71.99%
skin sensitisation - 0.8663 86.63%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity + 0.5715 57.15%
Acute Oral Toxicity (c) III 0.3747 37.47%
Estrogen receptor binding + 0.6496 64.96%
Androgen receptor binding + 0.6277 62.77%
Thyroid receptor binding - 0.5213 52.13%
Glucocorticoid receptor binding + 0.5427 54.27%
Aromatase binding + 0.7071 70.71%
PPAR gamma + 0.5479 54.79%
Honey bee toxicity - 0.7906 79.06%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.7600 76.00%
Fish aquatic toxicity - 0.3706 37.06%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.74% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.10% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.42% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.98% 96.61%
CHEMBL2581 P07339 Cathepsin D 87.21% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 85.50% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.39% 97.09%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.91% 96.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 83.18% 91.24%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.55% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 82.32% 95.93%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.81% 99.17%
CHEMBL4208 P20618 Proteasome component C5 80.52% 90.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.48% 97.25%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.39% 94.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.22% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cryptomeria japonica
Cycas beddomei
Cycas revoluta
Libocedrus bidwillii
Selaginella uncinata

Cross-Links

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PubChem 10325616
LOTUS LTS0189695
wikiData Q105135556