3-[(2S,3R,4S,5R,6S)-3,4-dihydroxy-6-methyl-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-2-(4-hydroxyphenyl)-8-(3-methylbut-2-enyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one

Details

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Internal ID d2cb909c-0dce-40e5-8887-7a25f87c8bbb
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-7-O-glycosides
IUPAC Name 3-[(2S,3R,4S,5R,6S)-3,4-dihydroxy-6-methyl-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-2-(4-hydroxyphenyl)-8-(3-methylbut-2-enyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(OC(C(C2O)O)OC3=C(OC4=C(C3=O)C(=CC(=C4CC=C(C)C)OC5C(C(C(C(O5)CO)O)O)O)O)C6=CC=C(C=C6)O)C)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@H]2[C@@H](O[C@H]([C@@H]([C@@H]2O)O)OC3=C(OC4=C(C3=O)C(=CC(=C4CC=C(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O)C6=CC=C(C=C6)O)C)O)O)O
InChI InChI=1S/C38H48O19/c1-13(2)5-10-18-20(53-38-30(49)27(46)24(43)21(12-39)54-38)11-19(41)22-25(44)35(33(55-34(18)22)16-6-8-17(40)9-7-16)57-37-31(50)28(47)32(15(4)52-37)56-36-29(48)26(45)23(42)14(3)51-36/h5-9,11,14-15,21,23-24,26-32,36-43,45-50H,10,12H2,1-4H3/t14-,15-,21+,23-,24+,26+,27-,28-,29+,30+,31+,32-,36-,37-,38+/m0/s1
InChI Key VCIVWTFJVYXKMA-RBHIFOBTSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C38H48O19
Molecular Weight 808.80 g/mol
Exact Mass 808.27897930 g/mol
Topological Polar Surface Area (TPSA) 304.00 Ų
XlogP 0.20
Atomic LogP (AlogP) -1.38
H-Bond Acceptor 19
H-Bond Donor 11
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3-[(2S,3R,4S,5R,6S)-3,4-dihydroxy-6-methyl-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-2-(4-hydroxyphenyl)-8-(3-methylbut-2-enyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8664 86.64%
Caco-2 - 0.9113 91.13%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.7171 71.71%
OATP2B1 inhibitior - 0.5741 57.41%
OATP1B1 inhibitior + 0.8814 88.14%
OATP1B3 inhibitior + 0.9366 93.66%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.8660 86.60%
P-glycoprotein inhibitior + 0.6420 64.20%
P-glycoprotein substrate + 0.5491 54.91%
CYP3A4 substrate + 0.6666 66.66%
CYP2C9 substrate - 0.6532 65.32%
CYP2D6 substrate - 0.8528 85.28%
CYP3A4 inhibition - 0.9436 94.36%
CYP2C9 inhibition - 0.7241 72.41%
CYP2C19 inhibition - 0.6819 68.19%
CYP2D6 inhibition - 0.8386 83.86%
CYP1A2 inhibition - 0.6373 63.73%
CYP2C8 inhibition + 0.7281 72.81%
CYP inhibitory promiscuity + 0.5000 50.00%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7420 74.20%
Eye corrosion - 0.9906 99.06%
Eye irritation - 0.9081 90.81%
Skin irritation - 0.7969 79.69%
Skin corrosion - 0.9499 94.99%
Ames mutagenesis - 0.5128 51.28%
Human Ether-a-go-go-Related Gene inhibition + 0.6944 69.44%
Micronuclear - 0.5367 53.67%
Hepatotoxicity - 0.6375 63.75%
skin sensitisation - 0.8659 86.59%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.6975 69.75%
Acute Oral Toxicity (c) III 0.6098 60.98%
Estrogen receptor binding + 0.8102 81.02%
Androgen receptor binding + 0.6680 66.80%
Thyroid receptor binding + 0.5350 53.50%
Glucocorticoid receptor binding + 0.6086 60.86%
Aromatase binding + 0.5683 56.83%
PPAR gamma + 0.7307 73.07%
Honey bee toxicity - 0.6475 64.75%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.9827 98.27%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.72% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.27% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.17% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 95.09% 94.73%
CHEMBL1951 P21397 Monoamine oxidase A 94.90% 91.49%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.73% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.44% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.44% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.60% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.58% 95.56%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 85.03% 93.10%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.67% 99.15%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 84.30% 95.78%
CHEMBL3194 P02766 Transthyretin 83.66% 90.71%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 83.45% 95.64%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.93% 86.92%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.77% 85.14%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.38% 96.00%
CHEMBL1937 Q92769 Histone deacetylase 2 81.16% 94.75%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 81.16% 91.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Epimedium davidii

Cross-Links

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PubChem 6326122
NPASS NPC219666