(2S,3R,4S,5S,6R)-2-[(1R,2R,4S)-2,4-dihydroxy-2-(5-hydroxy-3-methylpenta-1,3-dienyl)-1,3,3-trimethylcyclohexyl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

Top
Internal ID b7cdd787-7a6e-467f-a20e-858fd0b2e90a
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2S,3R,4S,5S,6R)-2-[(1R,2R,4S)-2,4-dihydroxy-2-(5-hydroxy-3-methylpenta-1,3-dienyl)-1,3,3-trimethylcyclohexyl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C21H36O9/c1-12(7-10-22)5-9-21(28)19(2,3)14(24)6-8-20(21,4)30-18-17(27)16(26)15(25)13(11-23)29-18/h5,7,9,13-18,22-28H,6,8,10-11H2,1-4H3/t13-,14+,15-,16+,17-,18+,20-,21-/m1/s1
InChI Key RJNOWCISCKYSDF-MGHHJFRGSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C21H36O9
Molecular Weight 432.50 g/mol
Exact Mass 432.23593272 g/mol
Topological Polar Surface Area (TPSA) 160.00 Ų
XlogP -0.70
Atomic LogP (AlogP) -1.03
H-Bond Acceptor 9
H-Bond Donor 7
Rotatable Bonds 6

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3R,4S,5S,6R)-2-[(1R,2R,4S)-2,4-dihydroxy-2-(5-hydroxy-3-methylpenta-1,3-dienyl)-1,3,3-trimethylcyclohexyl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5613 56.13%
Caco-2 - 0.7625 76.25%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.7784 77.84%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9014 90.14%
OATP1B3 inhibitior + 0.8623 86.23%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior - 0.8233 82.33%
P-glycoprotein inhibitior - 0.7769 77.69%
P-glycoprotein substrate - 0.8336 83.36%
CYP3A4 substrate + 0.6636 66.36%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8510 85.10%
CYP3A4 inhibition - 0.9059 90.59%
CYP2C9 inhibition - 0.7939 79.39%
CYP2C19 inhibition - 0.8401 84.01%
CYP2D6 inhibition - 0.9252 92.52%
CYP1A2 inhibition - 0.8675 86.75%
CYP2C8 inhibition - 0.6604 66.04%
CYP inhibitory promiscuity - 0.9012 90.12%
UGT catelyzed - 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6784 67.84%
Eye corrosion - 0.9894 98.94%
Eye irritation - 0.9676 96.76%
Skin irritation - 0.7252 72.52%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4843 48.43%
Micronuclear - 0.8400 84.00%
Hepatotoxicity - 0.6351 63.51%
skin sensitisation - 0.8224 82.24%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.6667 66.67%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.6518 65.18%
Acute Oral Toxicity (c) III 0.7083 70.83%
Estrogen receptor binding + 0.6328 63.28%
Androgen receptor binding + 0.6008 60.08%
Thyroid receptor binding + 0.6521 65.21%
Glucocorticoid receptor binding + 0.5404 54.04%
Aromatase binding + 0.7610 76.10%
PPAR gamma + 0.5524 55.24%
Honey bee toxicity - 0.7913 79.13%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.7800 78.00%
Fish aquatic toxicity + 0.6853 68.53%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1937 Q92769 Histone deacetylase 2 96.15% 94.75%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.98% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.92% 97.09%
CHEMBL226 P30542 Adenosine A1 receptor 91.61% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.28% 96.09%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 89.93% 95.83%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.82% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.59% 95.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.65% 95.89%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.84% 97.25%
CHEMBL237 P41145 Kappa opioid receptor 82.46% 98.10%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.97% 91.24%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 81.05% 100.00%
CHEMBL3401 O75469 Pregnane X receptor 80.25% 94.73%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 162999062
LOTUS LTS0013012
wikiData Q105237613