(2S,3R,4S,4aR,11bR)-2,3,4-trihydroxy-2,3,4,4a,5,11b-hexahydro-1H-[1,3]dioxolo[4,5-j]phenanthridin-6-one

Details

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Internal ID 28058681-b1cf-43b5-8974-b6d0a770da1e
Taxonomy Alkaloids and derivatives > Amaryllidaceae alkaloids > Phenanthridine- and phenanthridone-type amaryllidaceae alkaloids
IUPAC Name (2S,3R,4S,4aR,11bR)-2,3,4-trihydroxy-2,3,4,4a,5,11b-hexahydro-1H-[1,3]dioxolo[4,5-j]phenanthridin-6-one
SMILES (Canonical) C1C2C(C(C(C1O)O)O)NC(=O)C3=CC4=C(C=C23)OCO4
SMILES (Isomeric) C1[C@H]2[C@H]([C@@H]([C@@H]([C@H]1O)O)O)NC(=O)C3=CC4=C(C=C23)OCO4
InChI InChI=1S/C14H15NO6/c16-8-1-6-5-2-9-10(21-4-20-9)3-7(5)14(19)15-11(6)13(18)12(8)17/h2-3,6,8,11-13,16-18H,1,4H2,(H,15,19)/t6-,8+,11-,12-,13+/m1/s1
InChI Key KKAHUDOWKGIGAA-IAWGOJCDSA-N
Popularity 15 references in papers

Physical and Chemical Properties

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Molecular Formula C14H15NO6
Molecular Weight 293.27 g/mol
Exact Mass 293.08993720 g/mol
Topological Polar Surface Area (TPSA) 108.00 Ų
XlogP -0.80
Atomic LogP (AlogP) -0.90
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 0

Synonyms

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CHEMBL251056
SCHEMBL13271858
7-Deoxy-trans-dihydronarciclasine
[1,3]Dioxolo[4,5-j]phenanthridin-6(2H)-one, 1,3,4,4a,5,11b-hexahydro-2,3,4-trihydroxy-, (2S,3R,4S,4aR,11bR)-

2D Structure

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2D Structure of (2S,3R,4S,4aR,11bR)-2,3,4-trihydroxy-2,3,4,4a,5,11b-hexahydro-1H-[1,3]dioxolo[4,5-j]phenanthridin-6-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7932 79.32%
Caco-2 - 0.7936 79.36%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Mitochondria 0.4513 45.13%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8935 89.35%
OATP1B3 inhibitior + 0.9397 93.97%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.8067 80.67%
P-glycoprotein inhibitior - 0.9454 94.54%
P-glycoprotein substrate - 0.8081 80.81%
CYP3A4 substrate + 0.5151 51.51%
CYP2C9 substrate + 0.5895 58.95%
CYP2D6 substrate - 0.8412 84.12%
CYP3A4 inhibition - 0.8785 87.85%
CYP2C9 inhibition - 0.9322 93.22%
CYP2C19 inhibition - 0.9033 90.33%
CYP2D6 inhibition - 0.8729 87.29%
CYP1A2 inhibition - 0.7464 74.64%
CYP2C8 inhibition - 0.9006 90.06%
CYP inhibitory promiscuity - 0.9085 90.85%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6409 64.09%
Eye corrosion - 0.9920 99.20%
Eye irritation - 0.9628 96.28%
Skin irritation - 0.7971 79.71%
Skin corrosion - 0.9464 94.64%
Ames mutagenesis + 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6268 62.68%
Micronuclear + 0.8400 84.00%
Hepatotoxicity + 0.6000 60.00%
skin sensitisation - 0.8125 81.25%
Respiratory toxicity + 0.5222 52.22%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity - 0.6304 63.04%
Acute Oral Toxicity (c) III 0.6115 61.15%
Estrogen receptor binding - 0.6219 62.19%
Androgen receptor binding - 0.5454 54.54%
Thyroid receptor binding + 0.5463 54.63%
Glucocorticoid receptor binding - 0.4804 48.04%
Aromatase binding - 0.6483 64.83%
PPAR gamma - 0.5000 50.00%
Honey bee toxicity - 0.7591 75.91%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity - 0.7570 75.70%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 98.60% 96.77%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.26% 91.11%
CHEMBL2581 P07339 Cathepsin D 94.49% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.70% 97.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.23% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.77% 89.00%
CHEMBL4296 Q15858 Sodium channel protein type IX alpha subunit 89.78% 96.11%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 89.62% 90.71%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.49% 100.00%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 88.22% 94.80%
CHEMBL2850 P49840 Glycogen synthase kinase-3 alpha 86.96% 88.84%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.89% 95.56%
CHEMBL4225 P49760 Dual specificity protein kinase CLK2 86.45% 80.96%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.66% 96.21%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.48% 94.45%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.37% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 83.07% 96.09%
CHEMBL5311 P37023 Serine/threonine-protein kinase receptor R3 82.04% 82.67%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.29% 92.62%
CHEMBL4208 P20618 Proteasome component C5 80.49% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hymenocallis littoralis

Cross-Links

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PubChem 454239
LOTUS LTS0031882
wikiData Q105142076