2-[(3S,4S)-5-methoxycarbonyl-3-[(1S)-1-[(E)-2-methylbut-2-enoyl]oxyethyl]-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-4-yl]acetic acid

Details

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Internal ID a2e8229d-4997-4df8-9ccc-9e369e546404
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name 2-[(3S,4S)-5-methoxycarbonyl-3-[(1S)-1-[(E)-2-methylbut-2-enoyl]oxyethyl]-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-4-yl]acetic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C22H32O13/c1-5-9(2)19(29)33-10(3)15-11(6-14(24)25)12(20(30)31-4)8-32-21(15)35-22-18(28)17(27)16(26)13(7-23)34-22/h5,8,10-11,13,15-18,21-23,26-28H,6-7H2,1-4H3,(H,24,25)/b9-5+/t10-,11+,13+,15+,16+,17-,18+,21?,22-/m0/s1
InChI Key JVEXRQAKPOSWCW-NENWDJAGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C22H32O13
Molecular Weight 504.50 g/mol
Exact Mass 504.18429107 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP -0.70
Atomic LogP (AlogP) -1.18
H-Bond Acceptor 12
H-Bond Donor 5
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2-[(3S,4S)-5-methoxycarbonyl-3-[(1S)-1-[(E)-2-methylbut-2-enoyl]oxyethyl]-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-4-yl]acetic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7692 76.92%
Caco-2 - 0.8214 82.14%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.6696 66.96%
OATP2B1 inhibitior - 0.8657 86.57%
OATP1B1 inhibitior + 0.7453 74.53%
OATP1B3 inhibitior + 0.9366 93.66%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.6726 67.26%
P-glycoprotein inhibitior - 0.6283 62.83%
P-glycoprotein substrate - 0.6406 64.06%
CYP3A4 substrate + 0.6278 62.78%
CYP2C9 substrate - 0.7949 79.49%
CYP2D6 substrate - 0.8933 89.33%
CYP3A4 inhibition - 0.8777 87.77%
CYP2C9 inhibition - 0.8997 89.97%
CYP2C19 inhibition - 0.9151 91.51%
CYP2D6 inhibition - 0.9143 91.43%
CYP1A2 inhibition - 0.9396 93.96%
CYP2C8 inhibition - 0.6110 61.10%
CYP inhibitory promiscuity - 0.9362 93.62%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6852 68.52%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9473 94.73%
Skin irritation - 0.7956 79.56%
Skin corrosion - 0.9595 95.95%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5705 57.05%
Micronuclear - 0.6241 62.41%
Hepatotoxicity - 0.6949 69.49%
skin sensitisation - 0.8761 87.61%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity + 0.5461 54.61%
Acute Oral Toxicity (c) III 0.6528 65.28%
Estrogen receptor binding + 0.7628 76.28%
Androgen receptor binding - 0.5366 53.66%
Thyroid receptor binding - 0.5558 55.58%
Glucocorticoid receptor binding - 0.4655 46.55%
Aromatase binding - 0.5000 50.00%
PPAR gamma - 0.5224 52.24%
Honey bee toxicity - 0.7412 74.12%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity - 0.5867 58.67%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.27% 96.09%
CHEMBL2581 P07339 Cathepsin D 95.33% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.22% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.87% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 92.30% 96.00%
CHEMBL3401 O75469 Pregnane X receptor 92.19% 94.73%
CHEMBL221 P23219 Cyclooxygenase-1 85.69% 90.17%
CHEMBL5028 O14672 ADAM10 83.28% 97.50%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 81.50% 89.34%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.38% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.02% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Calycophyllum spruceanum

Cross-Links

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PubChem 162904992
LOTUS LTS0115766
wikiData Q105135660