4-hydroxymethyl-2-methoxyphenyl-1-O-beta-D-apiofuranosyl-(1->6)-O-beta-D-glucopyranoside

Details

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Internal ID 8e62c678-a70a-4067-bcce-a3a40cb59661
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name (2R,3S,4S,5R,6S)-2-[[(2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[4-(hydroxymethyl)-2-methoxyphenoxy]oxane-3,4,5-triol
SMILES (Canonical) COC1=C(C=CC(=C1)CO)OC2C(C(C(C(O2)COC3C(C(CO3)(CO)O)O)O)O)O
SMILES (Isomeric) COC1=C(C=CC(=C1)CO)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO[C@H]3[C@@H]([C@](CO3)(CO)O)O)O)O)O
InChI InChI=1S/C19H28O12/c1-27-11-4-9(5-20)2-3-10(11)30-17-15(24)14(23)13(22)12(31-17)6-28-18-16(25)19(26,7-21)8-29-18/h2-4,12-18,20-26H,5-8H2,1H3/t12-,13-,14+,15-,16+,17-,18-,19-/m1/s1
InChI Key CROSCHPQOAEYSN-OTCFHACESA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C19H28O12
Molecular Weight 448.40 g/mol
Exact Mass 448.15807632 g/mol
Topological Polar Surface Area (TPSA) 188.00 Ų
XlogP -2.90
Atomic LogP (AlogP) -3.17
H-Bond Acceptor 12
H-Bond Donor 7
Rotatable Bonds 8

Synonyms

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4-hydroxymethyl-2-methoxyphenyl-1-O-beta-D-apiofuranosyl-(1->6)-O-beta-D-glucopyranoside
CHEMBL1923076
Q27137316
3-Methoxy-4-(6-O-D-apio-beta-D-furanosyl-beta-D-glucopyranosyloxy)benzyl alcohol
(2R,3S,4S,5R,6S)-2-[[(2R,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[4-(hydroxymethyl)-2-methoxyphenoxy]oxane-3,4,5-triol

2D Structure

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2D Structure of 4-hydroxymethyl-2-methoxyphenyl-1-O-beta-D-apiofuranosyl-(1->6)-O-beta-D-glucopyranoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7448 74.48%
Caco-2 - 0.8588 85.88%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.6809 68.09%
OATP2B1 inhibitior - 0.8622 86.22%
OATP1B1 inhibitior + 0.8878 88.78%
OATP1B3 inhibitior + 0.9603 96.03%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.7863 78.63%
P-glycoprotein inhibitior - 0.7404 74.04%
P-glycoprotein substrate - 0.6142 61.42%
CYP3A4 substrate + 0.6302 63.02%
CYP2C9 substrate - 0.8016 80.16%
CYP2D6 substrate - 0.8074 80.74%
CYP3A4 inhibition - 0.9059 90.59%
CYP2C9 inhibition - 0.8728 87.28%
CYP2C19 inhibition - 0.8273 82.73%
CYP2D6 inhibition - 0.8988 89.88%
CYP1A2 inhibition - 0.8828 88.28%
CYP2C8 inhibition + 0.6739 67.39%
CYP inhibitory promiscuity - 0.8073 80.73%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5621 56.21%
Eye corrosion - 0.9921 99.21%
Eye irritation - 0.9493 94.93%
Skin irritation - 0.8293 82.93%
Skin corrosion - 0.9514 95.14%
Ames mutagenesis + 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3841 38.41%
Micronuclear - 0.6400 64.00%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.8506 85.06%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.6444 64.44%
Mitochondrial toxicity - 0.6875 68.75%
Nephrotoxicity - 0.8160 81.60%
Acute Oral Toxicity (c) III 0.7060 70.60%
Estrogen receptor binding + 0.7540 75.40%
Androgen receptor binding - 0.6598 65.98%
Thyroid receptor binding + 0.5863 58.63%
Glucocorticoid receptor binding + 0.5777 57.77%
Aromatase binding + 0.7146 71.46%
PPAR gamma + 0.6795 67.95%
Honey bee toxicity - 0.8027 80.27%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity - 0.5875 58.75%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.13% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.94% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 93.33% 95.93%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.72% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 91.76% 95.89%
CHEMBL241 Q14432 Phosphodiesterase 3A 91.27% 92.94%
CHEMBL2581 P07339 Cathepsin D 90.59% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.45% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.90% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.29% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.23% 97.09%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.53% 92.62%
CHEMBL3714130 P46095 G-protein coupled receptor 6 84.72% 97.36%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.51% 97.14%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 83.93% 95.89%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.72% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.66% 86.92%
CHEMBL4145 Q9UKV0 Histone deacetylase 9 83.15% 85.49%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.93% 96.00%
CHEMBL4208 P20618 Proteasome component C5 82.64% 90.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.78% 89.00%
CHEMBL4581 P52732 Kinesin-like protein 1 81.59% 93.18%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.80% 96.90%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.42% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acer saccharum
Epimedium wushanense

Cross-Links

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PubChem 21580495
NPASS NPC25821
LOTUS LTS0126875
wikiData Q27137316