(3S,6S)-3-(hydroxymethyl)-6-(1H-indol-3-ylmethyl)piperazine-2,5-dione

Details

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Internal ID d01217b9-f153-46e4-97d6-1a2f325b4bdf
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives
IUPAC Name (3S,6S)-3-(hydroxymethyl)-6-(1H-indol-3-ylmethyl)piperazine-2,5-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C14H15N3O3/c18-7-12-14(20)16-11(13(19)17-12)5-8-6-15-10-4-2-1-3-9(8)10/h1-4,6,11-12,15,18H,5,7H2,(H,16,20)(H,17,19)/t11-,12-/m0/s1
InChI Key GNBUEEFSNREBQN-RYUDHWBXSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C14H15N3O3
Molecular Weight 273.29 g/mol
Exact Mass 273.11134135 g/mol
Topological Polar Surface Area (TPSA) 94.20 Ų
XlogP 0.70
Atomic LogP (AlogP) -0.31
H-Bond Acceptor 3
H-Bond Donor 4
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3S,6S)-3-(hydroxymethyl)-6-(1H-indol-3-ylmethyl)piperazine-2,5-dione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9508 95.08%
Caco-2 - 0.6298 62.98%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability + 0.6143 61.43%
Subcellular localzation Mitochondria 0.6059 60.59%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9344 93.44%
OATP1B3 inhibitior + 0.9479 94.79%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8899 88.99%
BSEP inhibitior - 0.5929 59.29%
P-glycoprotein inhibitior - 0.9668 96.68%
P-glycoprotein substrate - 0.8191 81.91%
CYP3A4 substrate - 0.5079 50.79%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7781 77.81%
CYP3A4 inhibition - 0.8998 89.98%
CYP2C9 inhibition - 0.9095 90.95%
CYP2C19 inhibition - 0.9352 93.52%
CYP2D6 inhibition - 0.8851 88.51%
CYP1A2 inhibition - 0.6955 69.55%
CYP2C8 inhibition - 0.8836 88.36%
CYP inhibitory promiscuity - 0.9022 90.22%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.8700 87.00%
Carcinogenicity (trinary) Non-required 0.7356 73.56%
Eye corrosion - 0.9926 99.26%
Eye irritation - 0.9852 98.52%
Skin irritation - 0.8141 81.41%
Skin corrosion - 0.9568 95.68%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4242 42.42%
Micronuclear + 0.8700 87.00%
Hepatotoxicity - 0.5265 52.65%
skin sensitisation - 0.8931 89.31%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity + 0.5304 53.04%
Acute Oral Toxicity (c) III 0.5961 59.61%
Estrogen receptor binding - 0.5470 54.70%
Androgen receptor binding - 0.5847 58.47%
Thyroid receptor binding - 0.8399 83.99%
Glucocorticoid receptor binding - 0.4933 49.33%
Aromatase binding + 0.6882 68.82%
PPAR gamma + 0.5995 59.95%
Honey bee toxicity - 0.9243 92.43%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity - 0.7939 79.39%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.04% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.78% 95.56%
CHEMBL3310 Q96DB2 Histone deacetylase 11 93.27% 88.56%
CHEMBL4040 P28482 MAP kinase ERK2 92.80% 83.82%
CHEMBL1937 Q92769 Histone deacetylase 2 91.16% 94.75%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 90.96% 92.62%
CHEMBL2581 P07339 Cathepsin D 90.80% 98.95%
CHEMBL1951 P21397 Monoamine oxidase A 87.87% 91.49%
CHEMBL3155 P34969 Serotonin 7 (5-HT7) receptor 87.41% 90.71%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 86.64% 97.64%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 86.63% 94.62%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.14% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 84.79% 96.09%
CHEMBL5103 Q969S8 Histone deacetylase 10 84.72% 90.08%
CHEMBL213 P08588 Beta-1 adrenergic receptor 83.86% 95.56%
CHEMBL3830 Q2M2I8 Adaptor-associated kinase 83.35% 83.10%
CHEMBL3192 Q9BY41 Histone deacetylase 8 83.03% 93.99%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.61% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.41% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 70694585
LOTUS LTS0191942
wikiData Q105012281