(3S,6S)-3-benzyl-6-(hydroxymethyl)piperazine-2,5-dione

Details

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Internal ID 3eac80bc-4dd0-468c-b027-b78504c8f974
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives
IUPAC Name (3S,6S)-3-benzyl-6-(hydroxymethyl)piperazine-2,5-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C12H14N2O3/c15-7-10-12(17)13-9(11(16)14-10)6-8-4-2-1-3-5-8/h1-5,9-10,15H,6-7H2,(H,13,17)(H,14,16)/t9-,10-/m0/s1
InChI Key WIJKWEYCUNYTGY-UWVGGRQHSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C12H14N2O3
Molecular Weight 234.25 g/mol
Exact Mass 234.10044231 g/mol
Topological Polar Surface Area (TPSA) 78.40 Ų
XlogP 0.60
Atomic LogP (AlogP) -0.80
H-Bond Acceptor 3
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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35591-00-5
(3S,6S)-3-benzyl-6-(hydroxymethyl)piperazine-2,5-dione
Cyclo(Phe-Ser)
Cyclo(-L-Phe-L-Ser)
cyclo-(phe-ser)
cyclo(L-Phe-L-Ser)
cyclo(L-phenylalanyl-L-seryl)
CHEMBL2074761
SCHEMBL17966437
3-benzyl-6-(hydroxymethyl)-DKP
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of (3S,6S)-3-benzyl-6-(hydroxymethyl)piperazine-2,5-dione

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9149 91.49%
Caco-2 + 0.5538 55.38%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability + 0.8000 80.00%
Subcellular localzation Mitochondria 0.6482 64.82%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9374 93.74%
OATP1B3 inhibitior + 0.9455 94.55%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9399 93.99%
BSEP inhibitior - 0.8655 86.55%
P-glycoprotein inhibitior - 0.9698 96.98%
P-glycoprotein substrate - 0.8789 87.89%
CYP3A4 substrate - 0.6795 67.95%
CYP2C9 substrate - 0.8100 81.00%
CYP2D6 substrate - 0.8020 80.20%
CYP3A4 inhibition - 0.9125 91.25%
CYP2C9 inhibition - 0.9585 95.85%
CYP2C19 inhibition - 0.9380 93.80%
CYP2D6 inhibition - 0.9352 93.52%
CYP1A2 inhibition - 0.8527 85.27%
CYP2C8 inhibition - 0.8693 86.93%
CYP inhibitory promiscuity - 0.9842 98.42%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.7110 71.10%
Carcinogenicity (trinary) Non-required 0.7691 76.91%
Eye corrosion - 0.9918 99.18%
Eye irritation - 0.9270 92.70%
Skin irritation - 0.7758 77.58%
Skin corrosion - 0.9612 96.12%
Ames mutagenesis - 0.6454 64.54%
Human Ether-a-go-go-Related Gene inhibition - 0.6906 69.06%
Micronuclear + 0.8500 85.00%
Hepatotoxicity - 0.5073 50.73%
skin sensitisation - 0.8672 86.72%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity + 0.5322 53.22%
Acute Oral Toxicity (c) III 0.6701 67.01%
Estrogen receptor binding - 0.7775 77.75%
Androgen receptor binding - 0.6802 68.02%
Thyroid receptor binding - 0.8868 88.68%
Glucocorticoid receptor binding - 0.5794 57.94%
Aromatase binding + 0.5497 54.97%
PPAR gamma - 0.6502 65.02%
Honey bee toxicity - 0.9636 96.36%
Biodegradation - 0.6000 60.00%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity - 0.9196 91.96%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 95.42% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.93% 95.56%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 88.30% 97.64%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.13% 91.11%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 87.50% 94.62%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 87.41% 96.09%
CHEMBL2327 P21452 Neurokinin 2 receptor 83.62% 98.89%
CHEMBL4040 P28482 MAP kinase ERK2 82.98% 83.82%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.85% 94.45%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 80.67% 95.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 6951076
LOTUS LTS0029707
wikiData Q72460561