(3R)-all-trans-3-hydroxyretinal

Details

Top
Internal ID 55c8b7c9-2c0d-427f-8583-974213147ccb
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Retinoids
IUPAC Name (2E,4E,6E,8E)-9-[(4R)-4-hydroxy-2,6,6-trimethylcyclohexen-1-yl]-3,7-dimethylnona-2,4,6,8-tetraenal
SMILES (Canonical) CC1=C(C(CC(C1)O)(C)C)C=CC(=CC=CC(=CC=O)C)C
SMILES (Isomeric) CC1=C(C(C[C@@H](C1)O)(C)C)/C=C/C(=C/C=C/C(=C/C=O)/C)/C
InChI InChI=1S/C20H28O2/c1-15(7-6-8-16(2)11-12-21)9-10-19-17(3)13-18(22)14-20(19,4)5/h6-12,18,22H,13-14H2,1-5H3/b8-6+,10-9+,15-7+,16-11+/t18-/m1/s1
InChI Key QPRQNCDEPWLQRO-ZCEAMUHZSA-N
Popularity 5 references in papers

Physical and Chemical Properties

Top
Molecular Formula C20H28O2
Molecular Weight 300.40 g/mol
Exact Mass 300.208930132 g/mol
Topological Polar Surface Area (TPSA) 37.30 Ų
XlogP 4.50
Atomic LogP (AlogP) 4.69
H-Bond Acceptor 2
H-Bond Donor 1
Rotatable Bonds 5

Synonyms

Top
APO-15-zeaxanthinal
(3R)-all-trans-3-hydroxyretinal
3-Hydroxyretinal, (3R)-
8R3L21VBA6
Retinal, 3-hydroxy-, (3R)-
(-)-(R)-all-trans-3-hydroxyretinal
UNII-8R3L21VBA6
60046-53-9
3R-Hydroxy-15-apo-beta-caroten-15-al
(2E,4E,6E,8E)-9-[(4R)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7-dimethylnona-2,4,6,8-tetraenal (3R)-all-trans-3-hydroxyretinal
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of (3R)-all-trans-3-hydroxyretinal

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9970 99.70%
Caco-2 + 0.8879 88.79%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Mitochondria 0.7261 72.61%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8023 80.23%
OATP1B3 inhibitior + 0.9637 96.37%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.9322 93.22%
P-glycoprotein inhibitior - 0.8319 83.19%
P-glycoprotein substrate - 0.7681 76.81%
CYP3A4 substrate + 0.6177 61.77%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8643 86.43%
CYP3A4 inhibition - 0.8941 89.41%
CYP2C9 inhibition - 0.9074 90.74%
CYP2C19 inhibition - 0.8071 80.71%
CYP2D6 inhibition - 0.9447 94.47%
CYP1A2 inhibition - 0.9162 91.62%
CYP2C8 inhibition - 0.8061 80.61%
CYP inhibitory promiscuity - 0.9130 91.30%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.7057 70.57%
Carcinogenicity (trinary) Non-required 0.5606 56.06%
Eye corrosion - 0.9431 94.31%
Eye irritation - 0.9039 90.39%
Skin irritation + 0.6254 62.54%
Skin corrosion - 0.9558 95.58%
Ames mutagenesis - 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8388 83.88%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.6591 65.91%
skin sensitisation + 0.9201 92.01%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity - 0.5667 56.67%
Mitochondrial toxicity - 0.7750 77.50%
Nephrotoxicity + 0.7614 76.14%
Acute Oral Toxicity (c) III 0.8385 83.85%
Estrogen receptor binding + 0.7219 72.19%
Androgen receptor binding - 0.5653 56.53%
Thyroid receptor binding + 0.7213 72.13%
Glucocorticoid receptor binding - 0.6843 68.43%
Aromatase binding + 0.8146 81.46%
PPAR gamma + 0.8586 85.86%
Honey bee toxicity - 0.8524 85.24%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.8802 88.02%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.52% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.87% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.73% 91.11%
CHEMBL1870 P28702 Retinoid X receptor beta 86.39% 95.00%
CHEMBL2004 P48443 Retinoid X receptor gamma 83.87% 100.00%
CHEMBL2061 P19793 Retinoid X receptor alpha 83.31% 91.67%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.25% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.04% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.56% 86.33%
CHEMBL2581 P07339 Cathepsin D 81.43% 98.95%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Capsicum annuum

Cross-Links

Top
PubChem 25229573
LOTUS LTS0166987
wikiData Q27123313