(1S)-4-[(1E,3E,5E,7E,9E,11Z,13E,15E,17E)-12-(hydroxymethyl)-18-[(1R,4S)-4-hydroxy-2,6,6-trimethylcyclohex-2-en-1-yl]-3,7,16-trimethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-3,5,5-trimethylcyclohex-3-en-1-ol

Details

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Internal ID 3c310d42-ae74-49a2-b3cb-ca8bb86c056b
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Tetraterpenoids > Carotenoids > Xanthophylls
IUPAC Name (1S)-4-[(1E,3E,5E,7E,9E,11Z,13E,15E,17E)-12-(hydroxymethyl)-18-[(1R,4S)-4-hydroxy-2,6,6-trimethylcyclohex-2-en-1-yl]-3,7,16-trimethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-3,5,5-trimethylcyclohex-3-en-1-ol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C40H56O3/c1-29(15-12-16-30(2)20-22-37-32(4)24-35(42)26-39(37,6)7)14-10-11-18-34(28-41)19-13-17-31(3)21-23-38-33(5)25-36(43)27-40(38,8)9/h10-23,25,35-36,38,41-43H,24,26-28H2,1-9H3/b11-10+,15-12+,19-13+,22-20+,23-21+,29-14+,30-16+,31-17+,34-18-/t35-,36+,38-/m0/s1
InChI Key KWCKOZSJPUPNQQ-NERMHUSKSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C40H56O3
Molecular Weight 584.90 g/mol
Exact Mass 584.42294564 g/mol
Topological Polar Surface Area (TPSA) 60.70 Ų
XlogP 9.80
Atomic LogP (AlogP) 9.38
H-Bond Acceptor 3
H-Bond Donor 3
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1S)-4-[(1E,3E,5E,7E,9E,11Z,13E,15E,17E)-12-(hydroxymethyl)-18-[(1R,4S)-4-hydroxy-2,6,6-trimethylcyclohex-2-en-1-yl]-3,7,16-trimethyloctadeca-1,3,5,7,9,11,13,15,17-nonaenyl]-3,5,5-trimethylcyclohex-3-en-1-ol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9925 99.25%
Caco-2 - 0.8223 82.23%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.6570 65.70%
OATP2B1 inhibitior + 0.5757 57.57%
OATP1B1 inhibitior + 0.7708 77.08%
OATP1B3 inhibitior + 0.9412 94.12%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.9964 99.64%
P-glycoprotein inhibitior + 0.7871 78.71%
P-glycoprotein substrate + 0.5888 58.88%
CYP3A4 substrate + 0.6884 68.84%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7958 79.58%
CYP3A4 inhibition - 0.6971 69.71%
CYP2C9 inhibition - 0.8186 81.86%
CYP2C19 inhibition - 0.5927 59.27%
CYP2D6 inhibition - 0.9235 92.35%
CYP1A2 inhibition - 0.8913 89.13%
CYP2C8 inhibition + 0.6106 61.06%
CYP inhibitory promiscuity - 0.6295 62.95%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.7448 74.48%
Carcinogenicity (trinary) Non-required 0.6308 63.08%
Eye corrosion - 0.9832 98.32%
Eye irritation - 0.9160 91.60%
Skin irritation - 0.8580 85.80%
Skin corrosion - 0.9745 97.45%
Ames mutagenesis - 0.5645 56.45%
Human Ether-a-go-go-Related Gene inhibition + 0.8111 81.11%
Micronuclear - 0.8841 88.41%
Hepatotoxicity - 0.6974 69.74%
skin sensitisation + 0.6661 66.61%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.6000 60.00%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity + 0.6742 67.42%
Acute Oral Toxicity (c) III 0.7532 75.32%
Estrogen receptor binding + 0.8454 84.54%
Androgen receptor binding + 0.6937 69.37%
Thyroid receptor binding + 0.7097 70.97%
Glucocorticoid receptor binding + 0.8676 86.76%
Aromatase binding - 0.5137 51.37%
PPAR gamma + 0.7483 74.83%
Honey bee toxicity - 0.7733 77.33%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.8829 88.29%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.55% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.58% 91.11%
CHEMBL4040 P28482 MAP kinase ERK2 91.43% 83.82%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.21% 86.33%
CHEMBL2581 P07339 Cathepsin D 86.62% 98.95%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 85.91% 91.71%
CHEMBL1937 Q92769 Histone deacetylase 2 85.45% 94.75%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.41% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.35% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.24% 89.00%
CHEMBL3524 P56524 Histone deacetylase 4 84.52% 92.97%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.24% 95.89%
CHEMBL1870 P28702 Retinoid X receptor beta 82.08% 95.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 162928857
LOTUS LTS0176119
wikiData Q105146863