(2R,3S,4S,5R,6R)-2-[[(2S,3S,4S)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[(2E)-3,7-dimethylocta-2,6-dienoxy]oxane-3,4,5-triol

Details

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Internal ID d962faf5-fcbb-4907-b979-8257c45b24f6
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3S,4S,5R,6R)-2-[[(2S,3S,4S)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[(2E)-3,7-dimethylocta-2,6-dienoxy]oxane-3,4,5-triol
SMILES (Canonical) CC(=CCCC(=CCOC1C(C(C(C(O1)COC2C(C(CO2)(CO)O)O)O)O)O)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO[C@@H]2[C@H]([C@@](CO2)(CO)O)O)O)O)O)/C)C
InChI InChI=1S/C21H36O10/c1-12(2)5-4-6-13(3)7-8-28-19-17(25)16(24)15(23)14(31-19)9-29-20-18(26)21(27,10-22)11-30-20/h5,7,14-20,22-27H,4,6,8-11H2,1-3H3/b13-7+/t14-,15-,16+,17-,18-,19-,20+,21+/m1/s1
InChI Key RFFYIBOJHUSIGD-LHEYZSRXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C21H36O10
Molecular Weight 448.50 g/mol
Exact Mass 448.23084734 g/mol
Topological Polar Surface Area (TPSA) 158.00 Ų
XlogP -0.50
Atomic LogP (AlogP) -1.04
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-[[(2S,3S,4S)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[(2E)-3,7-dimethylocta-2,6-dienoxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5228 52.28%
Caco-2 - 0.8083 80.83%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.8012 80.12%
OATP2B1 inhibitior - 0.8595 85.95%
OATP1B1 inhibitior + 0.9099 90.99%
OATP1B3 inhibitior + 0.9083 90.83%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.5885 58.85%
P-glycoprotein inhibitior - 0.7073 70.73%
P-glycoprotein substrate - 0.8065 80.65%
CYP3A4 substrate + 0.6193 61.93%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8469 84.69%
CYP3A4 inhibition - 0.9290 92.90%
CYP2C9 inhibition - 0.8317 83.17%
CYP2C19 inhibition - 0.8831 88.31%
CYP2D6 inhibition - 0.9304 93.04%
CYP1A2 inhibition - 0.8852 88.52%
CYP2C8 inhibition - 0.6948 69.48%
CYP inhibitory promiscuity - 0.9318 93.18%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6200 62.00%
Eye corrosion - 0.9886 98.86%
Eye irritation - 0.9591 95.91%
Skin irritation - 0.6587 65.87%
Skin corrosion - 0.9495 94.95%
Ames mutagenesis - 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7559 75.59%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.7216 72.16%
skin sensitisation - 0.8707 87.07%
Respiratory toxicity - 0.6667 66.67%
Reproductive toxicity + 0.5556 55.56%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity + 0.5000 50.00%
Acute Oral Toxicity (c) III 0.4531 45.31%
Estrogen receptor binding + 0.6004 60.04%
Androgen receptor binding - 0.6254 62.54%
Thyroid receptor binding + 0.5594 55.94%
Glucocorticoid receptor binding - 0.5134 51.34%
Aromatase binding + 0.7132 71.32%
PPAR gamma + 0.6708 67.08%
Honey bee toxicity - 0.8170 81.70%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.8547 85.47%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.38% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 94.20% 95.93%
CHEMBL3401 O75469 Pregnane X receptor 89.28% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.13% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.18% 97.09%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 86.61% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.23% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.76% 100.00%
CHEMBL5957 P21589 5'-nucleotidase 82.51% 97.78%
CHEMBL2581 P07339 Cathepsin D 82.13% 98.95%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 81.82% 92.32%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 81.79% 92.08%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.73% 97.36%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.64% 96.90%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.37% 95.89%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.86% 97.25%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.25% 92.94%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hypoxis obtusa
Iris domestica

Cross-Links

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PubChem 162851165
LOTUS LTS0265532
wikiData Q105243280