Novapikromycin

Details

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Internal ID cb862df0-d0c2-4079-ae53-3900bb6e859b
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name (3R,5R,6S,7S,9R,11E,13S,14R)-6-[(2S,3R,4S,6R)-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy-13-hydroxy-14-[(1R)-1-hydroxyethyl]-3,5,7,9,13-pentamethyl-1-oxacyclotetradec-11-ene-2,4,10-trione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H47NO9/c1-14-12-15(2)24(37-27-23(33)20(29(8)9)13-16(3)36-27)17(4)22(32)18(5)26(34)38-25(19(6)30)28(7,35)11-10-21(14)31/h10-11,14-20,23-25,27,30,33,35H,12-13H2,1-9H3/b11-10+/t14-,15+,16-,17+,18-,19-,20+,23-,24+,25-,27+,28+/m1/s1
InChI Key JGNNRPWTNULSRW-BLNRMBNUSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C28H47NO9
Molecular Weight 541.70 g/mol
Exact Mass 541.32508208 g/mol
Topological Polar Surface Area (TPSA) 143.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 1.48
H-Bond Acceptor 10
H-Bond Donor 3
Rotatable Bonds 4

Synonyms

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CHEBI:77648
C20740
Q27147242
(3R,5R,6S,7S,9R,11E,13S,14R)-13-hydroxy-14-[(1R)-1-hydroxyethyl]-3,5,7,9,13-pentamethyl-2,4,10-trioxooxacyclotetradec-11-en-6-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside

2D Structure

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2D Structure of Novapikromycin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6730 67.30%
Caco-2 - 0.8139 81.39%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Lysosomes 0.4176 41.76%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9073 90.73%
OATP1B3 inhibitior + 0.9373 93.73%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.6641 66.41%
P-glycoprotein inhibitior + 0.6070 60.70%
P-glycoprotein substrate + 0.6016 60.16%
CYP3A4 substrate + 0.7146 71.46%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8591 85.91%
CYP3A4 inhibition - 0.7122 71.22%
CYP2C9 inhibition - 0.8774 87.74%
CYP2C19 inhibition - 0.8603 86.03%
CYP2D6 inhibition - 0.9284 92.84%
CYP1A2 inhibition - 0.8479 84.79%
CYP2C8 inhibition - 0.8879 88.79%
CYP inhibitory promiscuity - 0.9672 96.72%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5229 52.29%
Eye corrosion - 0.9849 98.49%
Eye irritation - 0.9230 92.30%
Skin irritation - 0.7699 76.99%
Skin corrosion - 0.9132 91.32%
Ames mutagenesis - 0.7154 71.54%
Human Ether-a-go-go-Related Gene inhibition - 0.5572 55.72%
Micronuclear + 0.5300 53.00%
Hepatotoxicity + 0.7772 77.72%
skin sensitisation - 0.8829 88.29%
Respiratory toxicity + 0.8778 87.78%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity - 0.7416 74.16%
Acute Oral Toxicity (c) III 0.5334 53.34%
Estrogen receptor binding + 0.7097 70.97%
Androgen receptor binding + 0.5811 58.11%
Thyroid receptor binding - 0.4896 48.96%
Glucocorticoid receptor binding + 0.6240 62.40%
Aromatase binding - 0.4943 49.43%
PPAR gamma + 0.6520 65.20%
Honey bee toxicity - 0.6467 64.67%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity - 0.4888 48.88%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.14% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.27% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.57% 96.09%
CHEMBL2581 P07339 Cathepsin D 95.46% 98.95%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 93.95% 96.77%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.12% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.87% 95.56%
CHEMBL4208 P20618 Proteasome component C5 87.42% 90.00%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 87.10% 95.71%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.99% 97.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.57% 96.21%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.58% 97.14%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.89% 95.89%
CHEMBL340 P08684 Cytochrome P450 3A4 82.67% 91.19%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.48% 100.00%
CHEMBL5103 Q969S8 Histone deacetylase 10 81.68% 90.08%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.98% 93.04%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.88% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 86289217
LOTUS LTS0170283
wikiData Q27147242