(2S,3R,4R,5R,6R)-2-methyl-6-[[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[(1S,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxyoxan-2-yl]methoxy]oxane-3,4,5-triol

Details

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Internal ID 741c52db-2164-4cd7-bb63-faee766b51c9
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4R,5R,6R)-2-methyl-6-[[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[(1S,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxyoxan-2-yl]methoxy]oxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)COC8C(C(C(C(O8)C)O)O)O)O)O)O)C)C)C)OC1
SMILES (Isomeric) C[C@@H]1CC[C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC=C6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO[C@H]8[C@@H]([C@@H]([C@H]([C@@H](O8)C)O)O)O)O)O)O)C)C)C)OC1
InChI InChI=1S/C39H62O12/c1-18-8-13-39(47-16-18)19(2)28-26(51-39)15-25-23-7-6-21-14-22(9-11-37(21,4)24(23)10-12-38(25,28)5)49-36-34(45)32(43)30(41)27(50-36)17-46-35-33(44)31(42)29(40)20(3)48-35/h6,18-20,22-36,40-45H,7-17H2,1-5H3/t18-,19+,20+,22+,23-,24+,25+,26+,27-,28+,29+,30-,31-,32+,33-,34-,35-,36-,37+,38+,39-/m1/s1
InChI Key UOBABKBXPUQJBZ-OVQBZKHUSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C39H62O12
Molecular Weight 722.90 g/mol
Exact Mass 722.42412741 g/mol
Topological Polar Surface Area (TPSA) 177.00 Ų
XlogP 2.40
Atomic LogP (AlogP) 2.39
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4R,5R,6R)-2-methyl-6-[[(2R,3S,4S,5R,6R)-3,4,5-trihydroxy-6-[(1S,2S,4S,5'R,6R,7S,8R,9S,12S,13R,16S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxyoxan-2-yl]methoxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7772 77.72%
Caco-2 - 0.8818 88.18%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7869 78.69%
OATP2B1 inhibitior - 0.8684 86.84%
OATP1B1 inhibitior + 0.9053 90.53%
OATP1B3 inhibitior + 0.8890 88.90%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior + 0.7748 77.48%
P-glycoprotein inhibitior + 0.7061 70.61%
P-glycoprotein substrate + 0.5274 52.74%
CYP3A4 substrate + 0.7398 73.98%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8129 81.29%
CYP3A4 inhibition - 0.9569 95.69%
CYP2C9 inhibition - 0.9022 90.22%
CYP2C19 inhibition - 0.8999 89.99%
CYP2D6 inhibition - 0.9316 93.16%
CYP1A2 inhibition - 0.8828 88.28%
CYP2C8 inhibition + 0.7484 74.84%
CYP inhibitory promiscuity - 0.8633 86.33%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5297 52.97%
Eye corrosion - 0.9894 98.94%
Eye irritation - 0.9238 92.38%
Skin irritation - 0.5533 55.33%
Skin corrosion - 0.9421 94.21%
Ames mutagenesis - 0.9700 97.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7374 73.74%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.9375 93.75%
skin sensitisation - 0.9157 91.57%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.8460 84.60%
Acute Oral Toxicity (c) I 0.4224 42.24%
Estrogen receptor binding + 0.8090 80.90%
Androgen receptor binding + 0.6938 69.38%
Thyroid receptor binding - 0.6182 61.82%
Glucocorticoid receptor binding + 0.5441 54.41%
Aromatase binding + 0.6619 66.19%
PPAR gamma + 0.6843 68.43%
Honey bee toxicity - 0.6183 61.83%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9686 96.86%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.79% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.28% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 97.12% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.04% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.28% 97.25%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.99% 100.00%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 91.83% 89.05%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.09% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.62% 95.89%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.80% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.05% 86.33%
CHEMBL5957 P21589 5'-nucleotidase 86.61% 97.78%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.25% 94.45%
CHEMBL5255 O00206 Toll-like receptor 4 85.42% 92.50%
CHEMBL1914 P06276 Butyrylcholinesterase 84.55% 95.00%
CHEMBL4803 P29474 Nitric-oxide synthase, endothelial 82.81% 86.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.38% 95.50%
CHEMBL2581 P07339 Cathepsin D 82.21% 98.95%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 82.05% 93.04%
CHEMBL3401 O75469 Pregnane X receptor 81.53% 94.73%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 80.17% 91.71%
CHEMBL5028 O14672 ADAM10 80.08% 97.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.04% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asparagus aethiopicus

Cross-Links

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PubChem 44429639
LOTUS LTS0073134
wikiData Q105276253