Nummularogenin

Details

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Internal ID c9c5246a-6618-4937-97dd-438ee93787c6
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (1R,2S,4S,5'S,6R,7S,8R,9S,12S,13S,16S,18S)-16-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10,15-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H40O5/c1-14-7-8-27(31-13-14)15(2)24-22(32-27)10-19-17-6-5-16-9-20(28)21(29)12-25(16,3)18(17)11-23(30)26(19,24)4/h14-20,22,24,28H,5-13H2,1-4H3/t14-,15-,16-,17+,18-,19-,20-,22-,24-,25-,26+,27+/m0/s1
InChI Key SSJCBJPSMYGDDE-ZADHDCGQSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C27H40O5
Molecular Weight 444.60 g/mol
Exact Mass 444.28757437 g/mol
Topological Polar Surface Area (TPSA) 72.80 Ų
XlogP 3.90
Atomic LogP (AlogP) 4.15
H-Bond Acceptor 5
H-Bond Donor 1
Rotatable Bonds 0

Synonyms

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94388-67-7
Nummularogenin
(1R,2S,4S,5'S,6R,7S,8R,9S,12S,13S,16S,18S)-16-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10,15-dione
(-)-Nummularogenin
Spirostan-2,12-dione, 3-hydroxy-, (3alpha,5alpha,25S)-

2D Structure

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2D Structure of Nummularogenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9553 95.53%
Caco-2 - 0.5233 52.33%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.8478 84.78%
OATP2B1 inhibitior - 0.7112 71.12%
OATP1B1 inhibitior + 0.8603 86.03%
OATP1B3 inhibitior + 0.8397 83.97%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.5217 52.17%
BSEP inhibitior + 0.7392 73.92%
P-glycoprotein inhibitior - 0.4788 47.88%
P-glycoprotein substrate - 0.5574 55.74%
CYP3A4 substrate + 0.6949 69.49%
CYP2C9 substrate - 0.6278 62.78%
CYP2D6 substrate - 0.7910 79.10%
CYP3A4 inhibition - 0.8325 83.25%
CYP2C9 inhibition - 0.9316 93.16%
CYP2C19 inhibition - 0.9229 92.29%
CYP2D6 inhibition - 0.9655 96.55%
CYP1A2 inhibition - 0.9095 90.95%
CYP2C8 inhibition - 0.5907 59.07%
CYP inhibitory promiscuity - 0.9872 98.72%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6075 60.75%
Eye corrosion - 0.9906 99.06%
Eye irritation - 0.9474 94.74%
Skin irritation - 0.5384 53.84%
Skin corrosion - 0.8876 88.76%
Ames mutagenesis - 0.7070 70.70%
Human Ether-a-go-go-Related Gene inhibition - 0.3825 38.25%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.6000 60.00%
skin sensitisation - 0.9275 92.75%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity + 0.6601 66.01%
Acute Oral Toxicity (c) III 0.4644 46.44%
Estrogen receptor binding + 0.7191 71.91%
Androgen receptor binding + 0.6954 69.54%
Thyroid receptor binding + 0.5891 58.91%
Glucocorticoid receptor binding + 0.7770 77.70%
Aromatase binding + 0.6652 66.52%
PPAR gamma + 0.5758 57.58%
Honey bee toxicity - 0.5959 59.59%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.6100 61.00%
Fish aquatic toxicity + 0.9310 93.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137262 O60341 LSD1/CoREST complex 91.63% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.16% 91.11%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.96% 100.00%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 89.98% 82.69%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 89.50% 93.04%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.06% 96.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 87.71% 92.94%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.46% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.85% 86.33%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.46% 97.25%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 83.10% 98.99%
CHEMBL1902 P62942 FK506-binding protein 1A 82.86% 97.05%
CHEMBL340 P08684 Cytochrome P450 3A4 81.87% 91.19%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.56% 90.71%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.26% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ziziphus nummularia

Cross-Links

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PubChem 21122661
LOTUS LTS0097274
wikiData Q105259719