methyl (4S,5E,6S)-5-ethylidene-4-[2-[2-(2-hydroxyethyl)phenoxy]-2-oxoethyl]-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

Details

Top
Internal ID 939c4df9-8b91-4b75-b4fd-2e09db9fe900
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name methyl (4S,5E,6S)-5-ethylidene-4-[2-[2-(2-hydroxyethyl)phenoxy]-2-oxoethyl]-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H32O12/c1-3-14-15(10-19(28)35-17-7-5-4-6-13(17)8-9-26)16(23(32)33-2)12-34-24(14)37-25-22(31)21(30)20(29)18(11-27)36-25/h3-7,12,15,18,20-22,24-27,29-31H,8-11H2,1-2H3/b14-3+/t15-,18+,20+,21-,22+,24-,25-/m0/s1
InChI Key IHYPYOXJAWVSDX-LBLKMDBTSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C25H32O12
Molecular Weight 524.50 g/mol
Exact Mass 524.18937645 g/mol
Topological Polar Surface Area (TPSA) 181.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -0.69
H-Bond Acceptor 12
H-Bond Donor 5
Rotatable Bonds 9

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of methyl (4S,5E,6S)-5-ethylidene-4-[2-[2-(2-hydroxyethyl)phenoxy]-2-oxoethyl]-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6959 69.59%
Caco-2 - 0.8516 85.16%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.6530 65.30%
OATP2B1 inhibitior - 0.8608 86.08%
OATP1B1 inhibitior + 0.7563 75.63%
OATP1B3 inhibitior + 0.9422 94.22%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.8282 82.82%
P-glycoprotein inhibitior - 0.4686 46.86%
P-glycoprotein substrate + 0.5838 58.38%
CYP3A4 substrate + 0.6680 66.80%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8820 88.20%
CYP3A4 inhibition - 0.8643 86.43%
CYP2C9 inhibition - 0.7617 76.17%
CYP2C19 inhibition - 0.8228 82.28%
CYP2D6 inhibition - 0.8891 88.91%
CYP1A2 inhibition - 0.8118 81.18%
CYP2C8 inhibition + 0.6946 69.46%
CYP inhibitory promiscuity - 0.8940 89.40%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.7138 71.38%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.9465 94.65%
Skin irritation - 0.8042 80.42%
Skin corrosion - 0.9471 94.71%
Ames mutagenesis + 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7865 78.65%
Micronuclear - 0.7100 71.00%
Hepatotoxicity - 0.7476 74.76%
skin sensitisation - 0.8133 81.33%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity + 0.6446 64.46%
Acute Oral Toxicity (c) III 0.6994 69.94%
Estrogen receptor binding + 0.8281 82.81%
Androgen receptor binding + 0.6226 62.26%
Thyroid receptor binding - 0.5251 52.51%
Glucocorticoid receptor binding + 0.6947 69.47%
Aromatase binding - 0.5494 54.94%
PPAR gamma + 0.6631 66.31%
Honey bee toxicity - 0.6273 62.73%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.6454 64.54%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.68% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.08% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.50% 86.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 93.19% 96.00%
CHEMBL2581 P07339 Cathepsin D 92.00% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 90.85% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.69% 99.17%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 88.51% 95.83%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.42% 86.92%
CHEMBL5028 O14672 ADAM10 83.85% 97.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.58% 95.56%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.50% 92.62%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.42% 95.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.57% 89.00%
CHEMBL224 P28223 Serotonin 2a (5-HT2a) receptor 81.14% 91.43%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.79% 97.14%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Picconia excelsa

Cross-Links

Top
PubChem 163185462
LOTUS LTS0034607
wikiData Q105113318