3-[(3S,5S,8R,9S,10S,13R,17S)-10,13-dimethyl-3-[(2R,3S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,4,5,6,7,8,9,11,12,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-2H-furan-5-one

Details

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Internal ID 40de5e9c-133f-4019-814b-afc53bad424c
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name 3-[(3S,5S,8R,9S,10S,13R,17S)-10,13-dimethyl-3-[(2R,3S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,4,5,6,7,8,9,11,12,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-2H-furan-5-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C29H42O8/c1-28-9-7-17(36-27-26(34)25(33)24(32)22(13-30)37-27)12-16(28)3-4-18-20-6-5-19(15-11-23(31)35-14-15)29(20,2)10-8-21(18)28/h6,11,16-19,21-22,24-27,30,32-34H,3-5,7-10,12-14H2,1-2H3/t16-,17-,18-,19+,21-,22?,24+,25?,26-,27+,28-,29+/m0/s1
InChI Key RFLSSMTUPPBUHS-BBTSLSMFSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C29H42O8
Molecular Weight 518.60 g/mol
Exact Mass 518.28796829 g/mol
Topological Polar Surface Area (TPSA) 126.00 Ų
XlogP 2.40
Atomic LogP (AlogP) 2.23
H-Bond Acceptor 8
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3-[(3S,5S,8R,9S,10S,13R,17S)-10,13-dimethyl-3-[(2R,3S,5S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2,3,4,5,6,7,8,9,11,12,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]-2H-furan-5-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8413 84.13%
Caco-2 - 0.8480 84.80%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.8755 87.55%
OATP2B1 inhibitior - 0.7239 72.39%
OATP1B1 inhibitior + 0.8979 89.79%
OATP1B3 inhibitior + 0.8953 89.53%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.4518 45.18%
P-glycoprotein inhibitior - 0.4732 47.32%
P-glycoprotein substrate - 0.5407 54.07%
CYP3A4 substrate + 0.7068 70.68%
CYP2C9 substrate - 0.8034 80.34%
CYP2D6 substrate - 0.8976 89.76%
CYP3A4 inhibition - 0.9391 93.91%
CYP2C9 inhibition - 0.9193 91.93%
CYP2C19 inhibition - 0.9223 92.23%
CYP2D6 inhibition - 0.9267 92.67%
CYP1A2 inhibition - 0.8838 88.38%
CYP2C8 inhibition - 0.6185 61.85%
CYP inhibitory promiscuity - 0.8577 85.77%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5722 57.22%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9552 95.52%
Skin irritation - 0.6011 60.11%
Skin corrosion - 0.9395 93.95%
Ames mutagenesis - 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8278 82.78%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.6375 63.75%
skin sensitisation - 0.9221 92.21%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.5918 59.18%
Acute Oral Toxicity (c) I 0.6467 64.67%
Estrogen receptor binding + 0.7562 75.62%
Androgen receptor binding + 0.7618 76.18%
Thyroid receptor binding - 0.6219 62.19%
Glucocorticoid receptor binding + 0.6654 66.54%
Aromatase binding + 0.6435 64.35%
PPAR gamma - 0.4931 49.31%
Honey bee toxicity - 0.7075 70.75%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.9702 97.02%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.52% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.02% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.80% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.81% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.60% 94.45%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 95.20% 96.77%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.52% 100.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.90% 85.14%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 90.12% 96.21%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.96% 95.56%
CHEMBL226 P30542 Adenosine A1 receptor 88.82% 95.93%
CHEMBL2581 P07339 Cathepsin D 85.72% 98.95%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.62% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 85.34% 92.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.01% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.30% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Calotropis procera

Cross-Links

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PubChem 163022902
LOTUS LTS0013347
wikiData Q105235478