(2S,3S,4S,5R,6R)-6-[(2S,3R,4S,5S)-2-[[(3S,4R,4aR,6aR,6bS,8aS,12aS,14aR,14bR)-8a-[(2S,3R,4S,5S,6R)-6-[[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxycarbonyl-4-(hydroxymethyl)-4,6a,6b,11,11,14b-hexamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxyoxan-4-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid

Details

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Internal ID 26ac9e0b-10f3-4b5c-84ee-95e57c9ade53
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3S,4S,5R,6R)-6-[(2S,3R,4S,5S)-2-[[(3S,4R,4aR,6aR,6bS,8aS,12aS,14aR,14bR)-8a-[(2S,3R,4S,5S,6R)-6-[[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxycarbonyl-4-(hydroxymethyl)-4,6a,6b,11,11,14b-hexamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxyoxan-4-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(OC(C(C2O)O)OCC3C(C(C(C(O3)OC(=O)C45CCC(CC4C6=CCC7C8(CCC(C(C8CCC7(C6(CC5)C)C)(C)CO)OC9C(C(C(CO9)O)OC1C(C(C(C(O1)C(=O)O)O)O)O)O)C)(C)C)O)O)O)CO)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2O)O)OC[C@@H]3[C@H]([C@@H]([C@H]([C@@H](O3)OC(=O)[C@@]45CC[C@@]6(C(=CC[C@H]7[C@]6(CC[C@@H]8[C@@]7(CC[C@@H]([C@@]8(C)CO)O[C@H]9[C@@H]([C@H]([C@H](CO9)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)C(=O)O)O)O)O)O)C)C)[C@@H]4CC(CC5)(C)C)C)O)O)O)CO)O)O)O
InChI InChI=1S/C59H94O28/c1-23-32(63)34(65)39(70)50(80-23)85-45-27(19-60)81-48(42(73)38(45)69)79-21-28-33(64)35(66)40(71)51(82-28)87-53(77)59-16-14-54(2,3)18-25(59)24-8-9-30-55(4)12-11-31(56(5,22-61)29(55)10-13-58(30,7)57(24,6)15-17-59)83-49-43(74)44(26(62)20-78-49)84-52-41(72)36(67)37(68)46(86-52)47(75)76/h8,23,25-46,48-52,60-74H,9-22H2,1-7H3,(H,75,76)/t23-,25-,26-,27+,28+,29+,30+,31-,32-,33+,34-,35-,36-,37-,38+,39+,40+,41+,42+,43+,44-,45+,46-,48+,49-,50-,51-,52+,55-,56-,57+,58+,59-/m0/s1
InChI Key RWYZMHFNPNEQNK-LGQLEKMFSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C59H94O28
Molecular Weight 1251.40 g/mol
Exact Mass 1250.59316234 g/mol
Topological Polar Surface Area (TPSA) 450.00 Ų
XlogP -2.20
Atomic LogP (AlogP) -3.48
H-Bond Acceptor 27
H-Bond Donor 16
Rotatable Bonds 14

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3S,4S,5R,6R)-6-[(2S,3R,4S,5S)-2-[[(3S,4R,4aR,6aR,6bS,8aS,12aS,14aR,14bR)-8a-[(2S,3R,4S,5S,6R)-6-[[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxycarbonyl-4-(hydroxymethyl)-4,6a,6b,11,11,14b-hexamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxyoxan-4-yl]oxy-3,4,5-trihydroxyoxane-2-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7601 76.01%
Caco-2 - 0.8722 87.22%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.8703 87.03%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8837 88.37%
OATP1B3 inhibitior - 0.4610 46.10%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.5026 50.26%
BSEP inhibitior + 0.8676 86.76%
P-glycoprotein inhibitior + 0.7441 74.41%
P-glycoprotein substrate + 0.5546 55.46%
CYP3A4 substrate + 0.7392 73.92%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8776 87.76%
CYP3A4 inhibition - 0.8310 83.10%
CYP2C9 inhibition - 0.8704 87.04%
CYP2C19 inhibition - 0.9216 92.16%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.9009 90.09%
CYP2C8 inhibition + 0.7984 79.84%
CYP inhibitory promiscuity - 0.9733 97.33%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6024 60.24%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.8988 89.88%
Skin irritation - 0.5876 58.76%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.6900 69.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7395 73.95%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.8625 86.25%
skin sensitisation - 0.9013 90.13%
Respiratory toxicity - 0.6333 63.33%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity - 0.9542 95.42%
Acute Oral Toxicity (c) III 0.8023 80.23%
Estrogen receptor binding + 0.7699 76.99%
Androgen receptor binding + 0.7464 74.64%
Thyroid receptor binding + 0.5943 59.43%
Glucocorticoid receptor binding + 0.7795 77.95%
Aromatase binding + 0.6719 67.19%
PPAR gamma + 0.8241 82.41%
Honey bee toxicity - 0.6477 64.77%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9585 95.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.45% 91.11%
CHEMBL3714130 P46095 G-protein coupled receptor 6 95.64% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.65% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.50% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.75% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.62% 96.09%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 90.99% 95.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.87% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.22% 94.45%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.25% 95.50%
CHEMBL2581 P07339 Cathepsin D 85.32% 98.95%
CHEMBL5028 O14672 ADAM10 83.52% 97.50%
CHEMBL226 P30542 Adenosine A1 receptor 82.62% 95.93%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 82.19% 93.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.35% 86.92%
CHEMBL5255 O00206 Toll-like receptor 4 80.80% 92.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.68% 100.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.67% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.60% 95.89%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.51% 96.90%
CHEMBL221 P23219 Cyclooxygenase-1 80.50% 90.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Akebia quinata

Cross-Links

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PubChem 162875822
LOTUS LTS0062606
wikiData Q105246841